Protein–RNA interactions for Protein: Q9NWS1

PARPBP, PCNA-interacting partner, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PARPBPQ9NWS1 DFFBP1-201ENST00000433250 979 ntBASIC13.93□□□□□ -0.18
PARPBPQ9NWS1 AL353779.1-201ENST00000434793 351 ntBASIC13.93□□□□□ -0.18
PARPBPQ9NWS1 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC13.93□□□□□ -0.18
PARPBPQ9NWS1 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC13.93□□□□□ -0.18
PARPBPQ9NWS1 SPTLC1P1-201ENST00000447199 261 ntBASIC13.93□□□□□ -0.18
PARPBPQ9NWS1 RHOA-206ENST00000454011 889 ntTSL 2 BASIC13.93□□□□□ -0.18
PARPBPQ9NWS1 KRT18P43-201ENST00000469825 1281 ntBASIC13.93□□□□□ -0.18
PARPBPQ9NWS1 SERBP1P5-201ENST00000510079 1181 ntBASIC13.93□□□□□ -0.18
PARPBPQ9NWS1 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC13.93□□□□□ -0.18
PARPBPQ9NWS1 RARRES2P5-201ENST00000564013 466 ntBASIC13.93□□□□□ -0.18
PARPBPQ9NWS1 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC13.93□□□□□ -0.18
PARPBPQ9NWS1 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
PARPBPQ9NWS1 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC13.93□□□□□ -0.18
PARPBPQ9NWS1 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC13.93□□□□□ -0.18
PARPBPQ9NWS1 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
PARPBPQ9NWS1 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
PARPBPQ9NWS1 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
PARPBPQ9NWS1 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
PARPBPQ9NWS1 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
PARPBPQ9NWS1 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC13.93□□□□□ -0.18
PARPBPQ9NWS1 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
PARPBPQ9NWS1 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
PARPBPQ9NWS1 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
PARPBPQ9NWS1 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC13.93□□□□□ -0.18
PARPBPQ9NWS1 MBP-202ENST00000355994 2772 ntTSL 5 BASIC13.93□□□□□ -0.18
PARPBPQ9NWS1 AC104640.1-201ENST00000562617 2109 ntBASIC13.93□□□□□ -0.18
PARPBPQ9NWS1 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
PARPBPQ9NWS1 CYP2AB1P-202ENST00000454440 1456 ntBASIC13.93□□□□□ -0.18
PARPBPQ9NWS1 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC13.93□□□□□ -0.18
PARPBPQ9NWS1 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
PARPBPQ9NWS1 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC13.93□□□□□ -0.18
PARPBPQ9NWS1 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
PARPBPQ9NWS1 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
PARPBPQ9NWS1 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
PARPBPQ9NWS1 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
PARPBPQ9NWS1 PLIN4-201ENST00000301286 6353 ntAPPRIS P2 TSL 5 BASIC13.92□□□□□ -0.18
PARPBPQ9NWS1 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC13.92□□□□□ -0.18
PARPBPQ9NWS1 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
PARPBPQ9NWS1 TK1-203ENST00000588734 1681 ntTSL 2 BASIC13.92□□□□□ -0.18
PARPBPQ9NWS1 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
PARPBPQ9NWS1 SETD1A-201ENST00000262519 6451 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
PARPBPQ9NWS1 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC13.92□□□□□ -0.18
PARPBPQ9NWS1 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
PARPBPQ9NWS1 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC13.92□□□□□ -0.18
PARPBPQ9NWS1 NOL9-201ENST00000377705 6649 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
PARPBPQ9NWS1 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
PARPBPQ9NWS1 AC236430.1-201ENST00000402231 743 ntBASIC13.92□□□□□ -0.18
PARPBPQ9NWS1 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC13.92□□□□□ -0.18
PARPBPQ9NWS1 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC13.92□□□□□ -0.18
PARPBPQ9NWS1 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
PARPBPQ9NWS1 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC13.92□□□□□ -0.18
PARPBPQ9NWS1 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
PARPBPQ9NWS1 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC13.92□□□□□ -0.18
PARPBPQ9NWS1 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC13.92□□□□□ -0.18
PARPBPQ9NWS1 COQ6-210ENST00000554920 649 ntTSL 3 BASIC13.92□□□□□ -0.18
PARPBPQ9NWS1 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC13.92□□□□□ -0.18
PARPBPQ9NWS1 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
PARPBPQ9NWS1 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC13.92□□□□□ -0.18
PARPBPQ9NWS1 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
PARPBPQ9NWS1 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
PARPBPQ9NWS1 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC13.92□□□□□ -0.18
PARPBPQ9NWS1 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
PARPBPQ9NWS1 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
PARPBPQ9NWS1 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC13.92□□□□□ -0.18
PARPBPQ9NWS1 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC13.92□□□□□ -0.18
PARPBPQ9NWS1 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
PARPBPQ9NWS1 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC13.92□□□□□ -0.18
PARPBPQ9NWS1 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
PARPBPQ9NWS1 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
PARPBPQ9NWS1 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
PARPBPQ9NWS1 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
PARPBPQ9NWS1 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
PARPBPQ9NWS1 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC13.92□□□□□ -0.18
PARPBPQ9NWS1 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
PARPBPQ9NWS1 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
PARPBPQ9NWS1 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC13.92□□□□□ -0.18
PARPBPQ9NWS1 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
PARPBPQ9NWS1 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
PARPBPQ9NWS1 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
PARPBPQ9NWS1 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
PARPBPQ9NWS1 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
PARPBPQ9NWS1 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
PARPBPQ9NWS1 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
PARPBPQ9NWS1 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
PARPBPQ9NWS1 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
PARPBPQ9NWS1 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC13.91□□□□□ -0.18
PARPBPQ9NWS1 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC13.91□□□□□ -0.18
PARPBPQ9NWS1 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC13.91□□□□□ -0.18
PARPBPQ9NWS1 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC13.91□□□□□ -0.18
PARPBPQ9NWS1 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
PARPBPQ9NWS1 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
PARPBPQ9NWS1 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
PARPBPQ9NWS1 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
PARPBPQ9NWS1 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC13.91□□□□□ -0.18
PARPBPQ9NWS1 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
PARPBPQ9NWS1 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
PARPBPQ9NWS1 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
PARPBPQ9NWS1 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC13.91□□□□□ -0.18
PARPBPQ9NWS1 CD81-207ENST00000481687 890 ntTSL 2 BASIC13.91□□□□□ -0.18
PARPBPQ9NWS1 AC104596.2-201ENST00000512793 793 ntBASIC13.91□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms