Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 KRT18P28-201ENST00000453838 1332 ntBASIC12.94□□□□□ -0.34
LIN7CQ9NUP9 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
LIN7CQ9NUP9 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
LIN7CQ9NUP9 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC12.94□□□□□ -0.34
LIN7CQ9NUP9 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
LIN7CQ9NUP9 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
LIN7CQ9NUP9 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC12.94□□□□□ -0.34
LIN7CQ9NUP9 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
LIN7CQ9NUP9 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
LIN7CQ9NUP9 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
LIN7CQ9NUP9 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC12.94□□□□□ -0.34
LIN7CQ9NUP9 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC12.94□□□□□ -0.34
LIN7CQ9NUP9 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
LIN7CQ9NUP9 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
LIN7CQ9NUP9 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
LIN7CQ9NUP9 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
LIN7CQ9NUP9 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
LIN7CQ9NUP9 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
LIN7CQ9NUP9 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
LIN7CQ9NUP9 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC12.94□□□□□ -0.34
LIN7CQ9NUP9 AL353705.2-201ENST00000428243 662 ntBASIC12.94□□□□□ -0.34
LIN7CQ9NUP9 GPS2P2-201ENST00000430745 888 ntBASIC12.94□□□□□ -0.34
LIN7CQ9NUP9 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC12.94□□□□□ -0.34
LIN7CQ9NUP9 AL139010.1-201ENST00000454878 894 ntBASIC12.94□□□□□ -0.34
LIN7CQ9NUP9 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC12.94□□□□□ -0.34
LIN7CQ9NUP9 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC12.94□□□□□ -0.34
LIN7CQ9NUP9 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
LIN7CQ9NUP9 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC12.94□□□□□ -0.34
LIN7CQ9NUP9 AC004449.1-201ENST00000564240 433 ntBASIC12.94□□□□□ -0.34
LIN7CQ9NUP9 AC026150.2-201ENST00000564693 1156 ntBASIC12.94□□□□□ -0.34
LIN7CQ9NUP9 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC12.94□□□□□ -0.34
LIN7CQ9NUP9 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
LIN7CQ9NUP9 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
LIN7CQ9NUP9 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
LIN7CQ9NUP9 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
LIN7CQ9NUP9 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
LIN7CQ9NUP9 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC12.94□□□□□ -0.34
LIN7CQ9NUP9 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
LIN7CQ9NUP9 USP49-203ENST00000394253 9034 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
LIN7CQ9NUP9 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC12.94□□□□□ -0.34
LIN7CQ9NUP9 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC12.94□□□□□ -0.34
LIN7CQ9NUP9 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC12.94□□□□□ -0.34
LIN7CQ9NUP9 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
LIN7CQ9NUP9 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC12.94□□□□□ -0.34
LIN7CQ9NUP9 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC12.94□□□□□ -0.34
LIN7CQ9NUP9 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC12.94□□□□□ -0.34
LIN7CQ9NUP9 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC12.94□□□□□ -0.34
LIN7CQ9NUP9 ZEB1-AS1-208ENST00000607166 2503 ntBASIC12.94□□□□□ -0.34
LIN7CQ9NUP9 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
LIN7CQ9NUP9 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
LIN7CQ9NUP9 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
LIN7CQ9NUP9 GSN-203ENST00000373808 2664 ntTSL 2 BASIC12.94□□□□□ -0.34
LIN7CQ9NUP9 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
LIN7CQ9NUP9 BRWD1-201ENST00000333229 10141 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
LIN7CQ9NUP9 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
LIN7CQ9NUP9 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
LIN7CQ9NUP9 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
LIN7CQ9NUP9 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC12.93□□□□□ -0.34
LIN7CQ9NUP9 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
LIN7CQ9NUP9 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC12.93□□□□□ -0.34
LIN7CQ9NUP9 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
LIN7CQ9NUP9 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC12.93□□□□□ -0.34
LIN7CQ9NUP9 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
LIN7CQ9NUP9 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC12.93□□□□□ -0.34
LIN7CQ9NUP9 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC12.93□□□□□ -0.34
LIN7CQ9NUP9 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC12.93□□□□□ -0.34
LIN7CQ9NUP9 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC12.93□□□□□ -0.34
LIN7CQ9NUP9 AL390755.1-201ENST00000623716 2027 ntBASIC12.93□□□□□ -0.34
LIN7CQ9NUP9 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
LIN7CQ9NUP9 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
LIN7CQ9NUP9 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
LIN7CQ9NUP9 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC12.93□□□□□ -0.34
LIN7CQ9NUP9 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
LIN7CQ9NUP9 OSBPL8-201ENST00000261183 7239 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
LIN7CQ9NUP9 OSBPL8-218ENST00000611266 7239 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
LIN7CQ9NUP9 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
LIN7CQ9NUP9 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC12.93□□□□□ -0.34
LIN7CQ9NUP9 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
LIN7CQ9NUP9 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
LIN7CQ9NUP9 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
LIN7CQ9NUP9 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
LIN7CQ9NUP9 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
LIN7CQ9NUP9 LBH-203ENST00000404397 543 ntTSL 4 BASIC12.93□□□□□ -0.34
LIN7CQ9NUP9 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC12.93□□□□□ -0.34
LIN7CQ9NUP9 SPDYE14P-201ENST00000442619 822 ntBASIC12.93□□□□□ -0.34
LIN7CQ9NUP9 CNN2P2-201ENST00000443536 909 ntBASIC12.93□□□□□ -0.34
LIN7CQ9NUP9 EEF1DP4-201ENST00000446006 880 ntBASIC12.93□□□□□ -0.34
LIN7CQ9NUP9 CNN2P3-201ENST00000450201 906 ntBASIC12.93□□□□□ -0.34
LIN7CQ9NUP9 PHKG1P2-201ENST00000457537 863 ntBASIC12.93□□□□□ -0.34
LIN7CQ9NUP9 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC12.93□□□□□ -0.34
LIN7CQ9NUP9 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC12.93□□□□□ -0.34
LIN7CQ9NUP9 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
LIN7CQ9NUP9 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
LIN7CQ9NUP9 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC12.93□□□□□ -0.34
LIN7CQ9NUP9 AL136317.3-201ENST00000618497 906 ntBASIC12.93□□□□□ -0.34
LIN7CQ9NUP9 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC12.93□□□□□ -0.34
LIN7CQ9NUP9 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
LIN7CQ9NUP9 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
LIN7CQ9NUP9 CYP4F24P-201ENST00000586049 1580 ntBASIC12.93□□□□□ -0.34
LIN7CQ9NUP9 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC12.93□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms