Protein–RNA interactions for Protein: Q9NTX5

ECHDC1, Ethylmalonyl-CoA decarboxylase, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1Q9NTX5 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC18.79■□□□□ 0.6
ECHDC1Q9NTX5 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC18.79■□□□□ 0.6
ECHDC1Q9NTX5 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC18.79■□□□□ 0.6
ECHDC1Q9NTX5 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ECHDC1Q9NTX5 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
ECHDC1Q9NTX5 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC18.79■□□□□ 0.6
ECHDC1Q9NTX5 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ECHDC1Q9NTX5 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
ECHDC1Q9NTX5 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ECHDC1Q9NTX5 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ECHDC1Q9NTX5 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ECHDC1Q9NTX5 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC18.79■□□□□ 0.6
ECHDC1Q9NTX5 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC18.79■□□□□ 0.6
ECHDC1Q9NTX5 SLC9A7P1-202ENST00000556476 2239 ntBASIC18.78■□□□□ 0.6
ECHDC1Q9NTX5 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
ECHDC1Q9NTX5 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
ECHDC1Q9NTX5 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ECHDC1Q9NTX5 AGER-206ENST00000375070 1463 ntTSL 5 BASIC18.78■□□□□ 0.6
ECHDC1Q9NTX5 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
ECHDC1Q9NTX5 DBET-201ENST00000630918 3363 ntBASIC18.78■□□□□ 0.6
ECHDC1Q9NTX5 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ECHDC1Q9NTX5 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC18.78■□□□□ 0.6
ECHDC1Q9NTX5 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ECHDC1Q9NTX5 AL359258.3-201ENST00000622910 2331 ntBASIC18.78■□□□□ 0.6
ECHDC1Q9NTX5 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
ECHDC1Q9NTX5 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
ECHDC1Q9NTX5 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ECHDC1Q9NTX5 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
ECHDC1Q9NTX5 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC18.78■□□□□ 0.6
ECHDC1Q9NTX5 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ECHDC1Q9NTX5 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
ECHDC1Q9NTX5 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ECHDC1Q9NTX5 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ECHDC1Q9NTX5 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC18.78■□□□□ 0.6
ECHDC1Q9NTX5 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ECHDC1Q9NTX5 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
ECHDC1Q9NTX5 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC18.78■□□□□ 0.6
ECHDC1Q9NTX5 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC18.78■□□□□ 0.6
ECHDC1Q9NTX5 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC18.78■□□□□ 0.6
ECHDC1Q9NTX5 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC18.78■□□□□ 0.6
ECHDC1Q9NTX5 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ECHDC1Q9NTX5 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC18.78■□□□□ 0.6
ECHDC1Q9NTX5 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC18.78■□□□□ 0.6
ECHDC1Q9NTX5 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
ECHDC1Q9NTX5 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
ECHDC1Q9NTX5 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC18.78■□□□□ 0.6
ECHDC1Q9NTX5 AC027307.3-201ENST00000594262 1100 ntBASIC18.78■□□□□ 0.6
ECHDC1Q9NTX5 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
ECHDC1Q9NTX5 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC18.78■□□□□ 0.6
ECHDC1Q9NTX5 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC18.78■□□□□ 0.6
ECHDC1Q9NTX5 MYB-242ENST00000618728 3545 ntTSL 5 BASIC18.78■□□□□ 0.6
ECHDC1Q9NTX5 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC18.78■□□□□ 0.6
ECHDC1Q9NTX5 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
ECHDC1Q9NTX5 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
ECHDC1Q9NTX5 AGAP7P-201ENST00000582299 2062 ntBASIC18.78■□□□□ 0.6
ECHDC1Q9NTX5 AGAP14-201ENST00000624701 2060 ntBASIC18.78■□□□□ 0.6
ECHDC1Q9NTX5 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
ECHDC1Q9NTX5 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC18.78■□□□□ 0.6
ECHDC1Q9NTX5 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ECHDC1Q9NTX5 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ECHDC1Q9NTX5 TCAF2P1-201ENST00000291129 2421 ntBASIC18.78■□□□□ 0.6
ECHDC1Q9NTX5 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
ECHDC1Q9NTX5 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC18.77■□□□□ 0.6
ECHDC1Q9NTX5 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC18.77■□□□□ 0.6
ECHDC1Q9NTX5 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ECHDC1Q9NTX5 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
ECHDC1Q9NTX5 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
ECHDC1Q9NTX5 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
ECHDC1Q9NTX5 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ECHDC1Q9NTX5 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ECHDC1Q9NTX5 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ECHDC1Q9NTX5 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
ECHDC1Q9NTX5 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC18.77■□□□□ 0.6
ECHDC1Q9NTX5 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ECHDC1Q9NTX5 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC18.77■□□□□ 0.6
ECHDC1Q9NTX5 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC18.77■□□□□ 0.6
ECHDC1Q9NTX5 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
ECHDC1Q9NTX5 SERF2-217ENST00000630046 862 ntTSL 5 BASIC18.77■□□□□ 0.6
ECHDC1Q9NTX5 AL033527.5-201ENST00000641382 801 ntBASIC18.77■□□□□ 0.6
ECHDC1Q9NTX5 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
ECHDC1Q9NTX5 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC18.77■□□□□ 0.6
ECHDC1Q9NTX5 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
ECHDC1Q9NTX5 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
ECHDC1Q9NTX5 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ECHDC1Q9NTX5 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC18.77■□□□□ 0.6
ECHDC1Q9NTX5 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ECHDC1Q9NTX5 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
ECHDC1Q9NTX5 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
ECHDC1Q9NTX5 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
ECHDC1Q9NTX5 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
ECHDC1Q9NTX5 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC18.77■□□□□ 0.59
ECHDC1Q9NTX5 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.59
ECHDC1Q9NTX5 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
ECHDC1Q9NTX5 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
ECHDC1Q9NTX5 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
ECHDC1Q9NTX5 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
ECHDC1Q9NTX5 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ECHDC1Q9NTX5 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ECHDC1Q9NTX5 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
ECHDC1Q9NTX5 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 67.8 ms