Protein–RNA interactions for Protein: Q9HD90

NEUROD4, Neurogenic differentiation factor 4, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEUROD4Q9HD90 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
NEUROD4Q9HD90 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
NEUROD4Q9HD90 RPL37AP1-201ENST00000412502 279 ntBASIC14.67□□□□□ -0.06
NEUROD4Q9HD90 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
NEUROD4Q9HD90 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC14.67□□□□□ -0.06
NEUROD4Q9HD90 AC015922.1-201ENST00000421102 1152 ntBASIC14.67□□□□□ -0.06
NEUROD4Q9HD90 GHSR-202ENST00000427970 912 ntBASIC14.67□□□□□ -0.06
NEUROD4Q9HD90 PNKD-204ENST00000436005 978 ntTSL 5 BASIC14.67□□□□□ -0.06
NEUROD4Q9HD90 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC14.67□□□□□ -0.06
NEUROD4Q9HD90 AC125807.1-201ENST00000483097 614 ntBASIC14.67□□□□□ -0.06
NEUROD4Q9HD90 INGX-202ENST00000489074 768 ntBASIC14.67□□□□□ -0.06
NEUROD4Q9HD90 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC14.67□□□□□ -0.06
NEUROD4Q9HD90 AC093214.1-201ENST00000511688 1107 ntBASIC14.67□□□□□ -0.06
NEUROD4Q9HD90 AC109322.1-201ENST00000524499 1264 ntBASIC14.67□□□□□ -0.06
NEUROD4Q9HD90 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC14.67□□□□□ -0.06
NEUROD4Q9HD90 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC14.67□□□□□ -0.06
NEUROD4Q9HD90 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC14.67□□□□□ -0.06
NEUROD4Q9HD90 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC14.67□□□□□ -0.06
NEUROD4Q9HD90 AC005498.2-205ENST00000593218 784 ntBASIC14.67□□□□□ -0.06
NEUROD4Q9HD90 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC14.67□□□□□ -0.06
NEUROD4Q9HD90 TEX28P1-201ENST00000613479 1221 ntBASIC14.67□□□□□ -0.06
NEUROD4Q9HD90 TEX28P2-201ENST00000617764 1221 ntBASIC14.67□□□□□ -0.06
NEUROD4Q9HD90 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC14.67□□□□□ -0.06
NEUROD4Q9HD90 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC14.67□□□□□ -0.06
NEUROD4Q9HD90 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
NEUROD4Q9HD90 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
NEUROD4Q9HD90 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC14.67□□□□□ -0.06
NEUROD4Q9HD90 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC14.67□□□□□ -0.06
NEUROD4Q9HD90 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
NEUROD4Q9HD90 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
NEUROD4Q9HD90 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
NEUROD4Q9HD90 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
NEUROD4Q9HD90 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
NEUROD4Q9HD90 AC063926.2-201ENST00000623766 1308 ntBASIC14.66□□□□□ -0.06
NEUROD4Q9HD90 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC14.66□□□□□ -0.06
NEUROD4Q9HD90 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
NEUROD4Q9HD90 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC14.66□□□□□ -0.06
NEUROD4Q9HD90 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
NEUROD4Q9HD90 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC14.66□□□□□ -0.06
NEUROD4Q9HD90 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC14.66□□□□□ -0.06
NEUROD4Q9HD90 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
NEUROD4Q9HD90 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
NEUROD4Q9HD90 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
NEUROD4Q9HD90 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC14.66□□□□□ -0.06
NEUROD4Q9HD90 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
NEUROD4Q9HD90 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
NEUROD4Q9HD90 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
NEUROD4Q9HD90 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC14.66□□□□□ -0.06
NEUROD4Q9HD90 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
NEUROD4Q9HD90 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC14.66□□□□□ -0.06
NEUROD4Q9HD90 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
NEUROD4Q9HD90 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
NEUROD4Q9HD90 MST1L-201ENST00000442552 2185 ntBASIC14.66□□□□□ -0.06
NEUROD4Q9HD90 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
NEUROD4Q9HD90 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC14.66□□□□□ -0.06
NEUROD4Q9HD90 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
NEUROD4Q9HD90 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC14.66□□□□□ -0.06
NEUROD4Q9HD90 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
NEUROD4Q9HD90 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
NEUROD4Q9HD90 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
NEUROD4Q9HD90 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
NEUROD4Q9HD90 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
NEUROD4Q9HD90 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
NEUROD4Q9HD90 AC005034.1-201ENST00000426657 489 ntBASIC14.66□□□□□ -0.06
NEUROD4Q9HD90 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC14.66□□□□□ -0.06
NEUROD4Q9HD90 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC14.66□□□□□ -0.06
NEUROD4Q9HD90 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC14.66□□□□□ -0.06
NEUROD4Q9HD90 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC14.66□□□□□ -0.06
NEUROD4Q9HD90 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
NEUROD4Q9HD90 AC073592.8-201ENST00000624126 511 ntBASIC14.66□□□□□ -0.06
NEUROD4Q9HD90 RAB34-223ENST00000636154 730 ntTSL 2 BASIC14.66□□□□□ -0.06
NEUROD4Q9HD90 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
NEUROD4Q9HD90 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
NEUROD4Q9HD90 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
NEUROD4Q9HD90 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC14.66□□□□□ -0.06
NEUROD4Q9HD90 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
NEUROD4Q9HD90 ZBED1P1-201ENST00000502364 1930 ntBASIC14.66□□□□□ -0.06
NEUROD4Q9HD90 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
NEUROD4Q9HD90 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
NEUROD4Q9HD90 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
NEUROD4Q9HD90 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC14.66□□□□□ -0.06
NEUROD4Q9HD90 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC14.66□□□□□ -0.06
NEUROD4Q9HD90 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
NEUROD4Q9HD90 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC14.66□□□□□ -0.06
NEUROD4Q9HD90 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
NEUROD4Q9HD90 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC14.65□□□□□ -0.06
NEUROD4Q9HD90 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC14.65□□□□□ -0.06
NEUROD4Q9HD90 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC14.65□□□□□ -0.06
NEUROD4Q9HD90 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC14.65□□□□□ -0.06
NEUROD4Q9HD90 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
NEUROD4Q9HD90 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
NEUROD4Q9HD90 PLIN4-201ENST00000301286 6353 ntAPPRIS P2 TSL 5 BASIC14.65□□□□□ -0.06
NEUROD4Q9HD90 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
NEUROD4Q9HD90 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
NEUROD4Q9HD90 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
NEUROD4Q9HD90 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
NEUROD4Q9HD90 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC14.65□□□□□ -0.06
NEUROD4Q9HD90 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
NEUROD4Q9HD90 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
NEUROD4Q9HD90 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms