Protein–RNA interactions for Protein: Q9HA90

EFCC1, EF-hand and coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFCC1Q9HA90 AP001282.1-201ENST00000531301 1499 ntBASIC18.04■□□□□ 0.48
EFCC1Q9HA90 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
EFCC1Q9HA90 ARL16-201ENST00000397498 1227 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
EFCC1Q9HA90 PTPA-218ENST00000435132 618 ntTSL 2 BASIC18.04■□□□□ 0.48
EFCC1Q9HA90 APOA2-204ENST00000464492 530 ntTSL 3 BASIC18.04■□□□□ 0.48
EFCC1Q9HA90 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC18.04■□□□□ 0.48
EFCC1Q9HA90 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC18.04■□□□□ 0.48
EFCC1Q9HA90 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
EFCC1Q9HA90 BHMT-206ENST00000524080 1207 ntTSL 2 BASIC18.04■□□□□ 0.48
EFCC1Q9HA90 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
EFCC1Q9HA90 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC18.04■□□□□ 0.48
EFCC1Q9HA90 AC105105.3-201ENST00000585470 646 ntTSL 5 BASIC18.04■□□□□ 0.48
EFCC1Q9HA90 NDUFV2P1-201ENST00000596415 907 ntBASIC18.04■□□□□ 0.48
EFCC1Q9HA90 AC097359.3-201ENST00000603982 1210 ntBASIC18.04■□□□□ 0.48
EFCC1Q9HA90 ARL16-214ENST00000621051 1181 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
EFCC1Q9HA90 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
EFCC1Q9HA90 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
EFCC1Q9HA90 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
EFCC1Q9HA90 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC18.04■□□□□ 0.48
EFCC1Q9HA90 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
EFCC1Q9HA90 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
EFCC1Q9HA90 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
EFCC1Q9HA90 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
EFCC1Q9HA90 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
EFCC1Q9HA90 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
EFCC1Q9HA90 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
EFCC1Q9HA90 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
EFCC1Q9HA90 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC18.04■□□□□ 0.48
EFCC1Q9HA90 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC18.03■□□□□ 0.48
EFCC1Q9HA90 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
EFCC1Q9HA90 AL121723.1-201ENST00000445194 1519 ntBASIC18.03■□□□□ 0.48
EFCC1Q9HA90 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC18.03■□□□□ 0.48
EFCC1Q9HA90 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
EFCC1Q9HA90 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
EFCC1Q9HA90 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
EFCC1Q9HA90 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
EFCC1Q9HA90 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
EFCC1Q9HA90 AGER-206ENST00000375070 1463 ntTSL 5 BASIC18.03■□□□□ 0.48
EFCC1Q9HA90 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
EFCC1Q9HA90 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC18.03■□□□□ 0.48
EFCC1Q9HA90 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC18.03■□□□□ 0.48
EFCC1Q9HA90 FAM45BP-202ENST00000592932 1624 ntBASIC18.03■□□□□ 0.48
EFCC1Q9HA90 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
EFCC1Q9HA90 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
EFCC1Q9HA90 IGF1-201ENST00000307046 1097 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
EFCC1Q9HA90 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
EFCC1Q9HA90 AC091046.1-201ENST00000331871 207 ntBASIC18.03■□□□□ 0.48
EFCC1Q9HA90 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC18.03■□□□□ 0.48
EFCC1Q9HA90 GUK1-206ENST00000366723 845 ntTSL 5 BASIC18.03■□□□□ 0.48
EFCC1Q9HA90 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
EFCC1Q9HA90 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
EFCC1Q9HA90 IGF1-203ENST00000392904 761 ntTSL 5 BASIC18.03■□□□□ 0.48
EFCC1Q9HA90 AL136361.1-201ENST00000435429 506 ntTSL 3 BASIC18.03■□□□□ 0.48
EFCC1Q9HA90 TSACC-208ENST00000481479 741 ntTSL 2 BASIC18.03■□□□□ 0.48
EFCC1Q9HA90 IMP3P2-201ENST00000489760 475 ntBASIC18.03■□□□□ 0.48
EFCC1Q9HA90 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
EFCC1Q9HA90 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC18.03■□□□□ 0.48
EFCC1Q9HA90 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC18.03■□□□□ 0.48
EFCC1Q9HA90 IFT20-206ENST00000578122 834 ntTSL 2 BASIC18.03■□□□□ 0.48
EFCC1Q9HA90 KSR1-207ENST00000578981 748 ntTSL 4 BASIC18.03■□□□□ 0.48
EFCC1Q9HA90 IFT20-208ENST00000578985 831 ntTSL 3 BASIC18.03■□□□□ 0.48
EFCC1Q9HA90 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC18.03■□□□□ 0.48
EFCC1Q9HA90 AC000095.1-201ENST00000603208 874 ntBASIC18.03■□□□□ 0.48
EFCC1Q9HA90 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
EFCC1Q9HA90 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
EFCC1Q9HA90 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
EFCC1Q9HA90 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
EFCC1Q9HA90 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
EFCC1Q9HA90 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC18.02■□□□□ 0.48
EFCC1Q9HA90 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
EFCC1Q9HA90 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
EFCC1Q9HA90 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
EFCC1Q9HA90 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC18.02■□□□□ 0.48
EFCC1Q9HA90 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
EFCC1Q9HA90 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC18.02■□□□□ 0.48
EFCC1Q9HA90 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC18.02■□□□□ 0.48
EFCC1Q9HA90 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
EFCC1Q9HA90 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC18.02■□□□□ 0.48
EFCC1Q9HA90 B9D1-202ENST00000268841 755 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
EFCC1Q9HA90 KRTAP19-9P-201ENST00000421795 191 ntBASIC18.02■□□□□ 0.48
EFCC1Q9HA90 PTPA-217ENST00000434095 870 ntTSL 2 BASIC18.02■□□□□ 0.48
EFCC1Q9HA90 LINC02028-203ENST00000443776 453 ntTSL 3 BASIC18.02■□□□□ 0.48
EFCC1Q9HA90 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
EFCC1Q9HA90 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
EFCC1Q9HA90 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
EFCC1Q9HA90 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
EFCC1Q9HA90 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC18.02■□□□□ 0.48
EFCC1Q9HA90 AL096828.3-201ENST00000615354 462 ntBASIC18.02■□□□□ 0.48
EFCC1Q9HA90 Metazoa_SRP.69-201ENST00000615730 281 ntBASIC18.02■□□□□ 0.48
EFCC1Q9HA90 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
EFCC1Q9HA90 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC18.02■□□□□ 0.47
EFCC1Q9HA90 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
EFCC1Q9HA90 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
EFCC1Q9HA90 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
EFCC1Q9HA90 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC18.02■□□□□ 0.47
EFCC1Q9HA90 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
EFCC1Q9HA90 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
EFCC1Q9HA90 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC18.01■□□□□ 0.47
EFCC1Q9HA90 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
EFCC1Q9HA90 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC18.01■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 70.5 ms