Protein–RNA interactions for Protein: Q9H7N4

SCAF1, Splicing factor, arginine/serine-rich 19, humanhuman

Known RBP Predictions only

Length 1,312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1Q9H7N4 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC23.39■■□□□ 1.34
SCAF1Q9H7N4 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC23.39■■□□□ 1.34
SCAF1Q9H7N4 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC23.39■■□□□ 1.34
SCAF1Q9H7N4 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
SCAF1Q9H7N4 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC23.39■■□□□ 1.34
SCAF1Q9H7N4 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC23.39■■□□□ 1.34
SCAF1Q9H7N4 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC23.39■■□□□ 1.34
SCAF1Q9H7N4 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC23.39■■□□□ 1.34
SCAF1Q9H7N4 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC23.39■■□□□ 1.34
SCAF1Q9H7N4 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC23.39■■□□□ 1.34
SCAF1Q9H7N4 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
SCAF1Q9H7N4 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC23.39■■□□□ 1.34
SCAF1Q9H7N4 AC142381.1-201ENST00000426099 345 ntBASIC23.39■■□□□ 1.34
SCAF1Q9H7N4 KRT43P-201ENST00000434019 910 ntBASIC23.39■■□□□ 1.34
SCAF1Q9H7N4 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC23.39■■□□□ 1.34
SCAF1Q9H7N4 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC23.39■■□□□ 1.34
SCAF1Q9H7N4 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC23.39■■□□□ 1.34
SCAF1Q9H7N4 U62317.3-201ENST00000608319 855 ntBASIC23.39■■□□□ 1.34
SCAF1Q9H7N4 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC23.39■■□□□ 1.34
SCAF1Q9H7N4 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
SCAF1Q9H7N4 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
SCAF1Q9H7N4 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC23.39■■□□□ 1.34
SCAF1Q9H7N4 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC23.39■■□□□ 1.33
SCAF1Q9H7N4 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC23.39■■□□□ 1.33
SCAF1Q9H7N4 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC23.39■■□□□ 1.33
SCAF1Q9H7N4 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC23.39■■□□□ 1.33
SCAF1Q9H7N4 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
SCAF1Q9H7N4 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC23.39■■□□□ 1.33
SCAF1Q9H7N4 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
SCAF1Q9H7N4 UCKL1-AS1-201ENST00000623569 3602 ntBASIC23.39■■□□□ 1.33
SCAF1Q9H7N4 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
SCAF1Q9H7N4 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
SCAF1Q9H7N4 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
SCAF1Q9H7N4 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC23.39■■□□□ 1.33
SCAF1Q9H7N4 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC23.38■■□□□ 1.33
SCAF1Q9H7N4 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC23.38■■□□□ 1.33
SCAF1Q9H7N4 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
SCAF1Q9H7N4 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
SCAF1Q9H7N4 ABI1-206ENST00000376140 1446 ntTSL 5 BASIC23.38■■□□□ 1.33
SCAF1Q9H7N4 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
SCAF1Q9H7N4 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
SCAF1Q9H7N4 NSL1-201ENST00000366976 722 ntTSL 2 BASIC23.38■■□□□ 1.33
SCAF1Q9H7N4 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
SCAF1Q9H7N4 TCEAL8-202ENST00000372685 1222 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
SCAF1Q9H7N4 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC23.38■■□□□ 1.33
SCAF1Q9H7N4 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
SCAF1Q9H7N4 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
SCAF1Q9H7N4 OR51A6P-201ENST00000418680 1004 ntBASIC23.38■■□□□ 1.33
SCAF1Q9H7N4 AL353705.2-201ENST00000428243 662 ntBASIC23.38■■□□□ 1.33
SCAF1Q9H7N4 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
SCAF1Q9H7N4 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC23.38■■□□□ 1.33
SCAF1Q9H7N4 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
SCAF1Q9H7N4 Z84485.1-202ENST00000499560 1230 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
SCAF1Q9H7N4 AC022616.2-201ENST00000523185 300 ntBASIC23.38■■□□□ 1.33
SCAF1Q9H7N4 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC23.38■■□□□ 1.33
SCAF1Q9H7N4 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC23.38■■□□□ 1.33
SCAF1Q9H7N4 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
SCAF1Q9H7N4 AL021578.1-201ENST00000613646 709 ntBASIC23.38■■□□□ 1.33
SCAF1Q9H7N4 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC23.38■■□□□ 1.33
SCAF1Q9H7N4 OR6C71P-202ENST00000641886 1107 ntBASIC23.38■■□□□ 1.33
SCAF1Q9H7N4 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
SCAF1Q9H7N4 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC23.38■■□□□ 1.33
SCAF1Q9H7N4 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
SCAF1Q9H7N4 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC23.38■■□□□ 1.33
SCAF1Q9H7N4 TUBB1P2-201ENST00000422712 1306 ntBASIC23.38■■□□□ 1.33
SCAF1Q9H7N4 TUBB1P1-201ENST00000503144 1300 ntBASIC23.38■■□□□ 1.33
SCAF1Q9H7N4 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
SCAF1Q9H7N4 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC23.38■■□□□ 1.33
SCAF1Q9H7N4 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
SCAF1Q9H7N4 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
SCAF1Q9H7N4 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC23.38■■□□□ 1.33
SCAF1Q9H7N4 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC23.38■■□□□ 1.33
SCAF1Q9H7N4 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC23.38■■□□□ 1.33
SCAF1Q9H7N4 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
SCAF1Q9H7N4 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
SCAF1Q9H7N4 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC23.38■■□□□ 1.33
SCAF1Q9H7N4 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC23.38■■□□□ 1.33
SCAF1Q9H7N4 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
SCAF1Q9H7N4 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC23.37■■□□□ 1.33
SCAF1Q9H7N4 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC23.37■■□□□ 1.33
SCAF1Q9H7N4 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC23.37■■□□□ 1.33
SCAF1Q9H7N4 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC23.37■■□□□ 1.33
SCAF1Q9H7N4 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC23.37■■□□□ 1.33
SCAF1Q9H7N4 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
SCAF1Q9H7N4 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC23.37■■□□□ 1.33
SCAF1Q9H7N4 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC23.37■■□□□ 1.33
SCAF1Q9H7N4 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC23.37■■□□□ 1.33
SCAF1Q9H7N4 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC23.37■■□□□ 1.33
SCAF1Q9H7N4 ST20-201ENST00000478497 1004 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
SCAF1Q9H7N4 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC23.37■■□□□ 1.33
SCAF1Q9H7N4 AC123567.1-201ENST00000548294 1261 ntBASIC23.37■■□□□ 1.33
SCAF1Q9H7N4 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC23.37■■□□□ 1.33
SCAF1Q9H7N4 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC23.37■■□□□ 1.33
SCAF1Q9H7N4 BNIP3P39-201ENST00000601077 554 ntBASIC23.37■■□□□ 1.33
SCAF1Q9H7N4 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC23.37■■□□□ 1.33
SCAF1Q9H7N4 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
SCAF1Q9H7N4 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
SCAF1Q9H7N4 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC23.37■■□□□ 1.33
SCAF1Q9H7N4 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC23.37■■□□□ 1.33
SCAF1Q9H7N4 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC23.37■■□□□ 1.33
Retrieved 100 of 98,524 protein–RNA pairs in 51.2 ms