Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
SSBP3Q9BWW4 AC132938.2-201ENST00000579188 680 ntBASIC12.97□□□□□ -0.33
SSBP3Q9BWW4 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC12.97□□□□□ -0.33
SSBP3Q9BWW4 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC12.97□□□□□ -0.33
SSBP3Q9BWW4 BRI3BPP1-201ENST00000594224 787 ntBASIC12.97□□□□□ -0.33
SSBP3Q9BWW4 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC12.97□□□□□ -0.33
SSBP3Q9BWW4 AC000095.1-201ENST00000603208 874 ntBASIC12.97□□□□□ -0.33
SSBP3Q9BWW4 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
SSBP3Q9BWW4 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
SSBP3Q9BWW4 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC12.97□□□□□ -0.33
SSBP3Q9BWW4 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC12.97□□□□□ -0.33
SSBP3Q9BWW4 AL591163.1-201ENST00000641757 987 ntBASIC12.97□□□□□ -0.33
SSBP3Q9BWW4 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SSBP3Q9BWW4 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SSBP3Q9BWW4 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
SSBP3Q9BWW4 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
SSBP3Q9BWW4 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC12.97□□□□□ -0.33
SSBP3Q9BWW4 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
SSBP3Q9BWW4 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
SSBP3Q9BWW4 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
SSBP3Q9BWW4 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
SSBP3Q9BWW4 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
SSBP3Q9BWW4 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
SSBP3Q9BWW4 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
SSBP3Q9BWW4 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SSBP3Q9BWW4 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SSBP3Q9BWW4 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
SSBP3Q9BWW4 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SSBP3Q9BWW4 AC010491.1-201ENST00000563101 2797 ntBASIC12.97□□□□□ -0.33
SSBP3Q9BWW4 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC12.97□□□□□ -0.33
SSBP3Q9BWW4 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
SSBP3Q9BWW4 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SSBP3Q9BWW4 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC12.97□□□□□ -0.33
SSBP3Q9BWW4 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
SSBP3Q9BWW4 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
SSBP3Q9BWW4 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC12.97□□□□□ -0.33
SSBP3Q9BWW4 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
SSBP3Q9BWW4 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
SSBP3Q9BWW4 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
SSBP3Q9BWW4 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC12.96□□□□□ -0.33
SSBP3Q9BWW4 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
SSBP3Q9BWW4 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
SSBP3Q9BWW4 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.33
SSBP3Q9BWW4 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
SSBP3Q9BWW4 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
SSBP3Q9BWW4 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC12.96□□□□□ -0.33
SSBP3Q9BWW4 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
SSBP3Q9BWW4 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC12.96□□□□□ -0.33
SSBP3Q9BWW4 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
SSBP3Q9BWW4 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
SSBP3Q9BWW4 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
SSBP3Q9BWW4 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
SSBP3Q9BWW4 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
SSBP3Q9BWW4 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
SSBP3Q9BWW4 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC12.96□□□□□ -0.33
SSBP3Q9BWW4 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC12.96□□□□□ -0.33
SSBP3Q9BWW4 SOCS2P1-201ENST00000417727 557 ntBASIC12.96□□□□□ -0.33
SSBP3Q9BWW4 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC12.96□□□□□ -0.33
SSBP3Q9BWW4 TTTY23B-201ENST00000442790 549 ntBASIC12.96□□□□□ -0.33
SSBP3Q9BWW4 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC12.96□□□□□ -0.33
SSBP3Q9BWW4 RN7SL837P-201ENST00000463010 287 ntBASIC12.96□□□□□ -0.33
SSBP3Q9BWW4 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC12.96□□□□□ -0.33
SSBP3Q9BWW4 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
SSBP3Q9BWW4 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
SSBP3Q9BWW4 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC12.96□□□□□ -0.33
SSBP3Q9BWW4 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC12.96□□□□□ -0.33
SSBP3Q9BWW4 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC12.96□□□□□ -0.33
SSBP3Q9BWW4 AC015910.1-201ENST00000579400 975 ntBASIC12.96□□□□□ -0.33
SSBP3Q9BWW4 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC12.96□□□□□ -0.33
SSBP3Q9BWW4 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
SSBP3Q9BWW4 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
SSBP3Q9BWW4 IGHV3-72-202ENST00000621503 303 ntBASIC12.96□□□□□ -0.33
SSBP3Q9BWW4 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
SSBP3Q9BWW4 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC12.96□□□□□ -0.33
SSBP3Q9BWW4 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC12.96□□□□□ -0.33
SSBP3Q9BWW4 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
SSBP3Q9BWW4 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
SSBP3Q9BWW4 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
SSBP3Q9BWW4 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
SSBP3Q9BWW4 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
SSBP3Q9BWW4 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
SSBP3Q9BWW4 FES-204ENST00000414248 2327 ntTSL 2 BASIC12.96□□□□□ -0.34
SSBP3Q9BWW4 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC12.96□□□□□ -0.34
SSBP3Q9BWW4 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
SSBP3Q9BWW4 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC12.96□□□□□ -0.34
SSBP3Q9BWW4 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
SSBP3Q9BWW4 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC12.96□□□□□ -0.34
SSBP3Q9BWW4 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
SSBP3Q9BWW4 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC12.96□□□□□ -0.34
SSBP3Q9BWW4 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
SSBP3Q9BWW4 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
SSBP3Q9BWW4 KRT8P22-201ENST00000562317 1415 ntBASIC12.96□□□□□ -0.34
SSBP3Q9BWW4 LINC02228-204ENST00000642115 2962 ntBASIC12.96□□□□□ -0.34
SSBP3Q9BWW4 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC12.96□□□□□ -0.34
SSBP3Q9BWW4 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC12.96□□□□□ -0.34
SSBP3Q9BWW4 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC12.96□□□□□ -0.34
SSBP3Q9BWW4 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
SSBP3Q9BWW4 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SSBP3Q9BWW4 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC12.95□□□□□ -0.34
SSBP3Q9BWW4 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms