Protein–RNA interactions for Protein: Q9BRP4

PAAF1, Proteasomal ATPase-associated factor 1, humanhuman

Predictions only

Length 392 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1Q9BRP4 CD8B2-202ENST00000417670 633 ntBASIC16.37■□□□□ 0.21
PAAF1Q9BRP4 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC16.37■□□□□ 0.21
PAAF1Q9BRP4 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
PAAF1Q9BRP4 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC16.37■□□□□ 0.21
PAAF1Q9BRP4 EMC4-209ENST00000559421 497 ntTSL 2 BASIC16.37■□□□□ 0.21
PAAF1Q9BRP4 C2orf69P2-201ENST00000562032 1123 ntBASIC16.37■□□□□ 0.21
PAAF1Q9BRP4 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC16.37■□□□□ 0.21
PAAF1Q9BRP4 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC16.37■□□□□ 0.21
PAAF1Q9BRP4 KLK3-211ENST00000597483 810 ntTSL 2 BASIC16.37■□□□□ 0.21
PAAF1Q9BRP4 AC244093.1-201ENST00000610837 814 ntBASIC16.37■□□□□ 0.21
PAAF1Q9BRP4 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC16.37■□□□□ 0.21
PAAF1Q9BRP4 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC16.37■□□□□ 0.21
PAAF1Q9BRP4 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC16.37■□□□□ 0.21
PAAF1Q9BRP4 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PAAF1Q9BRP4 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PAAF1Q9BRP4 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
PAAF1Q9BRP4 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
PAAF1Q9BRP4 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
PAAF1Q9BRP4 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PAAF1Q9BRP4 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC16.37■□□□□ 0.21
PAAF1Q9BRP4 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
PAAF1Q9BRP4 AC020907.1-201ENST00000616460 1350 ntBASIC16.37■□□□□ 0.21
PAAF1Q9BRP4 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
PAAF1Q9BRP4 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC16.37■□□□□ 0.21
PAAF1Q9BRP4 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
PAAF1Q9BRP4 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
PAAF1Q9BRP4 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
PAAF1Q9BRP4 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
PAAF1Q9BRP4 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PAAF1Q9BRP4 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
PAAF1Q9BRP4 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
PAAF1Q9BRP4 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC16.36■□□□□ 0.21
PAAF1Q9BRP4 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
PAAF1Q9BRP4 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC16.36■□□□□ 0.21
PAAF1Q9BRP4 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PAAF1Q9BRP4 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PAAF1Q9BRP4 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PAAF1Q9BRP4 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
PAAF1Q9BRP4 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PAAF1Q9BRP4 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC16.36■□□□□ 0.21
PAAF1Q9BRP4 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PAAF1Q9BRP4 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PAAF1Q9BRP4 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PAAF1Q9BRP4 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
PAAF1Q9BRP4 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC16.36■□□□□ 0.21
PAAF1Q9BRP4 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
PAAF1Q9BRP4 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
PAAF1Q9BRP4 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC16.36■□□□□ 0.21
PAAF1Q9BRP4 POM121L8P-201ENST00000417732 1281 ntBASIC16.36■□□□□ 0.21
PAAF1Q9BRP4 AC007969.1-201ENST00000433675 447 ntBASIC16.36■□□□□ 0.21
PAAF1Q9BRP4 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
PAAF1Q9BRP4 POM121L9P-203ENST00000441984 1285 ntBASIC16.36■□□□□ 0.21
PAAF1Q9BRP4 HOMER2P2-201ENST00000451621 847 ntBASIC16.36■□□□□ 0.21
PAAF1Q9BRP4 PFN1P12-201ENST00000455938 534 ntBASIC16.36■□□□□ 0.21
PAAF1Q9BRP4 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC16.36■□□□□ 0.21
PAAF1Q9BRP4 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PAAF1Q9BRP4 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC16.36■□□□□ 0.21
PAAF1Q9BRP4 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC16.36■□□□□ 0.21
PAAF1Q9BRP4 CD74-212ENST00000524315 584 ntTSL 5 BASIC16.36■□□□□ 0.21
PAAF1Q9BRP4 AP003171.2-201ENST00000528208 925 ntBASIC16.36■□□□□ 0.21
PAAF1Q9BRP4 AP006547.1-201ENST00000563435 692 ntBASIC16.36■□□□□ 0.21
PAAF1Q9BRP4 PRKN-211ENST00000615065 261 ntTSL 5 BASIC16.36■□□□□ 0.21
PAAF1Q9BRP4 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
PAAF1Q9BRP4 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PAAF1Q9BRP4 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
PAAF1Q9BRP4 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PAAF1Q9BRP4 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PAAF1Q9BRP4 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
PAAF1Q9BRP4 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
PAAF1Q9BRP4 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PAAF1Q9BRP4 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PAAF1Q9BRP4 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC16.36■□□□□ 0.21
PAAF1Q9BRP4 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
PAAF1Q9BRP4 AC132872.4-202ENST00000622924 2756 ntBASIC16.36■□□□□ 0.21
PAAF1Q9BRP4 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC16.36■□□□□ 0.21
PAAF1Q9BRP4 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
PAAF1Q9BRP4 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PAAF1Q9BRP4 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PAAF1Q9BRP4 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PAAF1Q9BRP4 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PAAF1Q9BRP4 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC16.35■□□□□ 0.21
PAAF1Q9BRP4 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PAAF1Q9BRP4 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC16.35■□□□□ 0.21
PAAF1Q9BRP4 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PAAF1Q9BRP4 HLA-DQB2-231ENST00000435145 2026 ntBASIC16.35■□□□□ 0.21
PAAF1Q9BRP4 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
PAAF1Q9BRP4 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PAAF1Q9BRP4 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC16.35■□□□□ 0.21
PAAF1Q9BRP4 CNN2P10-201ENST00000443067 918 ntBASIC16.35■□□□□ 0.21
PAAF1Q9BRP4 Z93015.1-201ENST00000451718 390 ntBASIC16.35■□□□□ 0.21
PAAF1Q9BRP4 RPSAP36-202ENST00000494591 1261 ntBASIC16.35■□□□□ 0.21
PAAF1Q9BRP4 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
PAAF1Q9BRP4 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC16.35■□□□□ 0.21
PAAF1Q9BRP4 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC16.35■□□□□ 0.21
PAAF1Q9BRP4 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC16.35■□□□□ 0.21
PAAF1Q9BRP4 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PAAF1Q9BRP4 AC243960.2-201ENST00000600996 747 ntBASIC16.35■□□□□ 0.21
PAAF1Q9BRP4 AL118558.3-201ENST00000607414 1079 ntBASIC16.35■□□□□ 0.21
PAAF1Q9BRP4 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
PAAF1Q9BRP4 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 322.1 ms