Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
VGLL1Q99990 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC11.81□□□□□ -0.52
VGLL1Q99990 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC11.81□□□□□ -0.52
VGLL1Q99990 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
VGLL1Q99990 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
VGLL1Q99990 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
VGLL1Q99990 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC11.81□□□□□ -0.52
VGLL1Q99990 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC11.81□□□□□ -0.52
VGLL1Q99990 ZBTB11-201ENST00000312938 6020 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
VGLL1Q99990 ABR-205ENST00000544583 5595 ntTSL 2 BASIC11.81□□□□□ -0.52
VGLL1Q99990 AL390755.1-201ENST00000623716 2027 ntBASIC11.81□□□□□ -0.52
VGLL1Q99990 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
VGLL1Q99990 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
VGLL1Q99990 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
VGLL1Q99990 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
VGLL1Q99990 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC11.81□□□□□ -0.52
VGLL1Q99990 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
VGLL1Q99990 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
VGLL1Q99990 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
VGLL1Q99990 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
VGLL1Q99990 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
VGLL1Q99990 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
VGLL1Q99990 MIR346-201ENST00000362234 95 ntBASIC11.81□□□□□ -0.52
VGLL1Q99990 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
VGLL1Q99990 AL590627.1-203ENST00000421194 1026 ntBASIC11.81□□□□□ -0.52
VGLL1Q99990 MED15P5-201ENST00000423150 992 ntBASIC11.81□□□□□ -0.52
VGLL1Q99990 FAM58CP-201ENST00000435741 640 ntBASIC11.81□□□□□ -0.52
VGLL1Q99990 SPCS2P4-201ENST00000436160 681 ntBASIC11.81□□□□□ -0.52
VGLL1Q99990 FDX1P1-201ENST00000449115 551 ntBASIC11.81□□□□□ -0.52
VGLL1Q99990 SPDYE11-202ENST00000450699 704 ntBASIC11.81□□□□□ -0.52
VGLL1Q99990 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC11.81□□□□□ -0.52
VGLL1Q99990 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
VGLL1Q99990 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
VGLL1Q99990 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC11.81□□□□□ -0.52
VGLL1Q99990 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC11.81□□□□□ -0.52
VGLL1Q99990 RNF34-208ENST00000555076 593 ntTSL 3 BASIC11.81□□□□□ -0.52
VGLL1Q99990 SPDYE9P-201ENST00000570642 692 ntBASIC11.81□□□□□ -0.52
VGLL1Q99990 AC140113.2-201ENST00000604370 208 ntBASIC11.81□□□□□ -0.52
VGLL1Q99990 AC026979.3-201ENST00000607315 403 ntBASIC11.81□□□□□ -0.52
VGLL1Q99990 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC11.81□□□□□ -0.52
VGLL1Q99990 SPDYE10P-202ENST00000612005 668 ntBASIC11.81□□□□□ -0.52
VGLL1Q99990 SPDYE8P-202ENST00000612377 668 ntBASIC11.81□□□□□ -0.52
VGLL1Q99990 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC11.81□□□□□ -0.52
VGLL1Q99990 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC11.81□□□□□ -0.52
VGLL1Q99990 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC11.81□□□□□ -0.52
VGLL1Q99990 ZBED1P1-201ENST00000502364 1930 ntBASIC11.81□□□□□ -0.52
VGLL1Q99990 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
VGLL1Q99990 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC11.81□□□□□ -0.52
VGLL1Q99990 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
VGLL1Q99990 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
VGLL1Q99990 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
VGLL1Q99990 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
VGLL1Q99990 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
VGLL1Q99990 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
VGLL1Q99990 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC11.81□□□□□ -0.52
VGLL1Q99990 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
VGLL1Q99990 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
VGLL1Q99990 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC11.81□□□□□ -0.52
VGLL1Q99990 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
VGLL1Q99990 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC11.81□□□□□ -0.52
VGLL1Q99990 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
VGLL1Q99990 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC11.81□□□□□ -0.52
VGLL1Q99990 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
VGLL1Q99990 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
VGLL1Q99990 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
VGLL1Q99990 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC11.8□□□□□ -0.52
VGLL1Q99990 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC11.8□□□□□ -0.52
VGLL1Q99990 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC11.8□□□□□ -0.52
VGLL1Q99990 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
VGLL1Q99990 MROH4P-201ENST00000431302 1578 ntBASIC11.8□□□□□ -0.52
VGLL1Q99990 AL607033.1-201ENST00000623900 1599 ntBASIC11.8□□□□□ -0.52
VGLL1Q99990 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC11.8□□□□□ -0.52
VGLL1Q99990 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
VGLL1Q99990 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
VGLL1Q99990 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
VGLL1Q99990 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
VGLL1Q99990 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
VGLL1Q99990 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC11.8□□□□□ -0.52
VGLL1Q99990 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
VGLL1Q99990 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
VGLL1Q99990 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC11.8□□□□□ -0.52
VGLL1Q99990 AC023274.1-201ENST00000418278 595 ntBASIC11.8□□□□□ -0.52
VGLL1Q99990 AC026396.1-201ENST00000419388 421 ntBASIC11.8□□□□□ -0.52
VGLL1Q99990 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC11.8□□□□□ -0.52
VGLL1Q99990 AL591424.1-201ENST00000442569 1213 ntBASIC11.8□□□□□ -0.52
VGLL1Q99990 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
VGLL1Q99990 KRT8P48-201ENST00000515599 1220 ntBASIC11.8□□□□□ -0.52
VGLL1Q99990 IGHV3-62-201ENST00000520057 340 ntBASIC11.8□□□□□ -0.52
VGLL1Q99990 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC11.8□□□□□ -0.52
VGLL1Q99990 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
VGLL1Q99990 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC11.8□□□□□ -0.52
VGLL1Q99990 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC11.8□□□□□ -0.52
VGLL1Q99990 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC11.8□□□□□ -0.52
VGLL1Q99990 MAX-210ENST00000555419 765 ntTSL 5 BASIC11.8□□□□□ -0.52
VGLL1Q99990 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC11.8□□□□□ -0.52
VGLL1Q99990 LINC01225-203ENST00000563550 1244 ntBASIC11.8□□□□□ -0.52
VGLL1Q99990 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC11.8□□□□□ -0.52
VGLL1Q99990 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC11.8□□□□□ -0.52
VGLL1Q99990 NAA38-207ENST00000576861 556 ntTSL 3 BASIC11.8□□□□□ -0.52
VGLL1Q99990 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC11.8□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms