Protein–RNA interactions for Protein: Q99795

GPA33, Cell surface A33 antigen, humanhuman

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPA33Q99795 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
GPA33Q99795 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
GPA33Q99795 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
GPA33Q99795 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
GPA33Q99795 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
GPA33Q99795 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
GPA33Q99795 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
GPA33Q99795 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
GPA33Q99795 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
GPA33Q99795 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
GPA33Q99795 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.15
GPA33Q99795 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
GPA33Q99795 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
GPA33Q99795 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
GPA33Q99795 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.15
GPA33Q99795 DEK-201ENST00000244776 1441 ntTSL 2 BASIC14.08□□□□□ -0.15
GPA33Q99795 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.15
GPA33Q99795 FES-203ENST00000394302 2133 ntTSL 5 BASIC14.08□□□□□ -0.16
GPA33Q99795 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
GPA33Q99795 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC14.08□□□□□ -0.16
GPA33Q99795 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC14.08□□□□□ -0.16
GPA33Q99795 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
GPA33Q99795 REXO1L4P-201ENST00000605109 1937 ntBASIC14.08□□□□□ -0.16
GPA33Q99795 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
GPA33Q99795 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC14.08□□□□□ -0.16
GPA33Q99795 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
GPA33Q99795 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
GPA33Q99795 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC14.08□□□□□ -0.16
GPA33Q99795 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC14.08□□□□□ -0.16
GPA33Q99795 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC14.08□□□□□ -0.16
GPA33Q99795 SLED1-202ENST00000512051 380 ntBASIC14.08□□□□□ -0.16
GPA33Q99795 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC14.08□□□□□ -0.16
GPA33Q99795 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC14.08□□□□□ -0.16
GPA33Q99795 UBL5-208ENST00000593087 320 ntTSL 3 BASIC14.08□□□□□ -0.16
GPA33Q99795 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC14.08□□□□□ -0.16
GPA33Q99795 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC14.08□□□□□ -0.16
GPA33Q99795 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC14.08□□□□□ -0.16
GPA33Q99795 AF228730.6-201ENST00000641497 218 ntBASIC14.08□□□□□ -0.16
GPA33Q99795 AC084121.3-201ENST00000641716 218 ntBASIC14.08□□□□□ -0.16
GPA33Q99795 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
GPA33Q99795 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
GPA33Q99795 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC14.08□□□□□ -0.16
GPA33Q99795 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC14.08□□□□□ -0.16
GPA33Q99795 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC14.08□□□□□ -0.16
GPA33Q99795 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
GPA33Q99795 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC14.08□□□□□ -0.16
GPA33Q99795 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
GPA33Q99795 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
GPA33Q99795 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
GPA33Q99795 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC14.08□□□□□ -0.16
GPA33Q99795 AL035456.1-201ENST00000456064 1369 ntBASIC14.08□□□□□ -0.16
GPA33Q99795 Z97205.2-201ENST00000564697 1639 ntBASIC14.08□□□□□ -0.16
GPA33Q99795 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
GPA33Q99795 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
GPA33Q99795 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
GPA33Q99795 INTS4P1-203ENST00000641008 3683 ntBASIC14.08□□□□□ -0.16
GPA33Q99795 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC14.07□□□□□ -0.16
GPA33Q99795 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
GPA33Q99795 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
GPA33Q99795 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC14.07□□□□□ -0.16
GPA33Q99795 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC14.07□□□□□ -0.16
GPA33Q99795 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
GPA33Q99795 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
GPA33Q99795 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
GPA33Q99795 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC14.07□□□□□ -0.16
GPA33Q99795 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
GPA33Q99795 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
GPA33Q99795 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
GPA33Q99795 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
GPA33Q99795 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
GPA33Q99795 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC14.07□□□□□ -0.16
GPA33Q99795 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
GPA33Q99795 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
GPA33Q99795 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC14.07□□□□□ -0.16
GPA33Q99795 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
GPA33Q99795 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
GPA33Q99795 AP006288.1-201ENST00000446065 395 ntBASIC14.07□□□□□ -0.16
GPA33Q99795 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
GPA33Q99795 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC14.07□□□□□ -0.16
GPA33Q99795 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC14.07□□□□□ -0.16
GPA33Q99795 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
GPA33Q99795 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC14.07□□□□□ -0.16
GPA33Q99795 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC14.07□□□□□ -0.16
GPA33Q99795 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
GPA33Q99795 SNHG9-202ENST00000564014 471 ntBASIC14.07□□□□□ -0.16
GPA33Q99795 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC14.07□□□□□ -0.16
GPA33Q99795 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC14.07□□□□□ -0.16
GPA33Q99795 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC14.07□□□□□ -0.16
GPA33Q99795 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
GPA33Q99795 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
GPA33Q99795 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC14.07□□□□□ -0.16
GPA33Q99795 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
GPA33Q99795 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
GPA33Q99795 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
GPA33Q99795 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
GPA33Q99795 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
GPA33Q99795 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
GPA33Q99795 TK1-203ENST00000588734 1681 ntTSL 2 BASIC14.07□□□□□ -0.16
GPA33Q99795 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
GPA33Q99795 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 78.7 ms