Protein–RNA interactions for Protein: Q99638

RAD9A, Cell cycle checkpoint control protein RAD9A, humanhuman

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAD9AQ99638 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RAD9AQ99638 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
RAD9AQ99638 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RAD9AQ99638 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC16.35■□□□□ 0.21
RAD9AQ99638 AC131097.3-203ENST00000420272 1193 ntTSL 5 BASIC16.35■□□□□ 0.21
RAD9AQ99638 AC104784.1-201ENST00000473096 294 ntBASIC16.35■□□□□ 0.21
RAD9AQ99638 MCPH1-AS1-203ENST00000525186 869 ntTSL 3 BASIC16.35■□□□□ 0.21
RAD9AQ99638 IQSEC3P1-201ENST00000538799 536 ntBASIC16.35■□□□□ 0.21
RAD9AQ99638 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
RAD9AQ99638 AP000894.2-204ENST00000577358 473 ntTSL 5 BASIC16.35■□□□□ 0.21
RAD9AQ99638 AC005324.6-201ENST00000587972 613 ntBASIC16.35■□□□□ 0.21
RAD9AQ99638 AP001043.1-205ENST00000623098 1033 ntTSL 5 BASIC16.35■□□□□ 0.21
RAD9AQ99638 AC068587.8-201ENST00000641239 219 ntBASIC16.35■□□□□ 0.21
RAD9AQ99638 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC16.35■□□□□ 0.21
RAD9AQ99638 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RAD9AQ99638 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
RAD9AQ99638 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC16.35■□□□□ 0.21
RAD9AQ99638 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC16.35■□□□□ 0.21
RAD9AQ99638 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
RAD9AQ99638 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
RAD9AQ99638 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC16.35■□□□□ 0.21
RAD9AQ99638 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
RAD9AQ99638 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
RAD9AQ99638 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
RAD9AQ99638 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RAD9AQ99638 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
RAD9AQ99638 AL139384.1-201ENST00000612143 3047 ntBASIC16.35■□□□□ 0.21
RAD9AQ99638 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RAD9AQ99638 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC16.34■□□□□ 0.21
RAD9AQ99638 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
RAD9AQ99638 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RAD9AQ99638 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RAD9AQ99638 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC16.34■□□□□ 0.21
RAD9AQ99638 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RAD9AQ99638 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RAD9AQ99638 DPCD-202ENST00000370151 858 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RAD9AQ99638 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RAD9AQ99638 AL391832.2-201ENST00000418557 889 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RAD9AQ99638 AL353637.1-201ENST00000451571 732 ntBASIC16.34■□□□□ 0.21
RAD9AQ99638 PPP2R1A-209ENST00000477989 444 ntTSL 3 BASIC16.34■□□□□ 0.21
RAD9AQ99638 LY6E-208ENST00000520531 490 ntTSL 2 BASIC16.34■□□□□ 0.21
RAD9AQ99638 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
RAD9AQ99638 LINC01475-201ENST00000548010 766 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RAD9AQ99638 MIR4750-201ENST00000584564 56 ntBASIC16.34■□□□□ 0.21
RAD9AQ99638 AP003419.4-201ENST00000616071 517 ntBASIC16.34■□□□□ 0.21
RAD9AQ99638 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC16.34■□□□□ 0.21
RAD9AQ99638 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC16.34■□□□□ 0.21
RAD9AQ99638 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC16.34■□□□□ 0.21
RAD9AQ99638 DNASE1L2-204ENST00000567494 1301 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RAD9AQ99638 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
RAD9AQ99638 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
RAD9AQ99638 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RAD9AQ99638 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RAD9AQ99638 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RAD9AQ99638 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RAD9AQ99638 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
RAD9AQ99638 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC16.33■□□□□ 0.21
RAD9AQ99638 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
RAD9AQ99638 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
RAD9AQ99638 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
RAD9AQ99638 AC055811.4-201ENST00000624039 1754 ntBASIC16.33■□□□□ 0.21
RAD9AQ99638 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
RAD9AQ99638 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC16.33■□□□□ 0.21
RAD9AQ99638 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
RAD9AQ99638 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
RAD9AQ99638 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC16.33■□□□□ 0.21
RAD9AQ99638 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
RAD9AQ99638 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
RAD9AQ99638 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RAD9AQ99638 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
RAD9AQ99638 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
RAD9AQ99638 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.2
RAD9AQ99638 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RAD9AQ99638 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RAD9AQ99638 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC16.33■□□□□ 0.2
RAD9AQ99638 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
RAD9AQ99638 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RAD9AQ99638 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.2
RAD9AQ99638 GHSR-202ENST00000427970 912 ntBASIC16.33■□□□□ 0.2
RAD9AQ99638 MYO16-AS1-201ENST00000439299 580 ntTSL 5 BASIC16.33■□□□□ 0.2
RAD9AQ99638 PUDPP3-201ENST00000445368 636 ntBASIC16.33■□□□□ 0.2
RAD9AQ99638 AC125604.1-201ENST00000496255 707 ntBASIC16.33■□□□□ 0.2
RAD9AQ99638 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC16.33■□□□□ 0.2
RAD9AQ99638 SAP25-201ENST00000538735 837 ntAPPRIS P2 TSL 3 BASIC16.33■□□□□ 0.2
RAD9AQ99638 C14orf132-202ENST00000553782 536 ntTSL 4 BASIC16.33■□□□□ 0.2
RAD9AQ99638 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
RAD9AQ99638 RN7SL555P-201ENST00000584742 339 ntBASIC16.33■□□□□ 0.2
RAD9AQ99638 AC020922.3-201ENST00000595064 547 ntBASIC16.33■□□□□ 0.2
RAD9AQ99638 DYRK1B-208ENST00000601972 772 ntTSL 2 BASIC16.33■□□□□ 0.2
RAD9AQ99638 COX10-AS1-206ENST00000602743 576 ntTSL 5 BASIC16.33■□□□□ 0.2
RAD9AQ99638 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
RAD9AQ99638 AL162426.1-201ENST00000624141 743 ntBASIC16.33■□□□□ 0.2
RAD9AQ99638 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC16.33■□□□□ 0.2
RAD9AQ99638 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
RAD9AQ99638 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
RAD9AQ99638 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC16.33■□□□□ 0.2
RAD9AQ99638 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RAD9AQ99638 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
RAD9AQ99638 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC16.33■□□□□ 0.2
RAD9AQ99638 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC16.33■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms