Protein–RNA interactions for Protein: Q99616

CCL13, C-C motif chemokine 13, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL13Q99616 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CCL13Q99616 AL162727.3-201ENST00000635661 2787 ntBASIC12.98□□□□□ -0.33
CCL13Q99616 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
CCL13Q99616 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC12.98□□□□□ -0.33
CCL13Q99616 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CCL13Q99616 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC12.98□□□□□ -0.33
CCL13Q99616 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CCL13Q99616 C18orf15-201ENST00000623680 2534 ntBASIC12.98□□□□□ -0.33
CCL13Q99616 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CCL13Q99616 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
CCL13Q99616 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC12.98□□□□□ -0.33
CCL13Q99616 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
CCL13Q99616 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CCL13Q99616 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CCL13Q99616 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC12.98□□□□□ -0.33
CCL13Q99616 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CCL13Q99616 CALY-203ENST00000368558 825 ntTSL 5 BASIC12.98□□□□□ -0.33
CCL13Q99616 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC12.98□□□□□ -0.33
CCL13Q99616 NME2-201ENST00000393183 568 ntTSL 2 BASIC12.98□□□□□ -0.33
CCL13Q99616 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC12.98□□□□□ -0.33
CCL13Q99616 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CCL13Q99616 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CCL13Q99616 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC12.98□□□□□ -0.33
CCL13Q99616 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC12.98□□□□□ -0.33
CCL13Q99616 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC12.98□□□□□ -0.33
CCL13Q99616 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC12.98□□□□□ -0.33
CCL13Q99616 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CCL13Q99616 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CCL13Q99616 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC12.98□□□□□ -0.33
CCL13Q99616 AC008494.3-201ENST00000606615 944 ntBASIC12.98□□□□□ -0.33
CCL13Q99616 AC099568.2-201ENST00000609194 695 ntBASIC12.98□□□□□ -0.33
CCL13Q99616 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC12.98□□□□□ -0.33
CCL13Q99616 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC12.98□□□□□ -0.33
CCL13Q99616 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
CCL13Q99616 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC12.98□□□□□ -0.33
CCL13Q99616 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CCL13Q99616 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CCL13Q99616 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC12.98□□□□□ -0.33
CCL13Q99616 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
CCL13Q99616 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CCL13Q99616 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC12.98□□□□□ -0.33
CCL13Q99616 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC12.98□□□□□ -0.33
CCL13Q99616 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC12.98□□□□□ -0.33
CCL13Q99616 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CCL13Q99616 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CCL13Q99616 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
CCL13Q99616 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CCL13Q99616 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CCL13Q99616 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC12.98□□□□□ -0.33
CCL13Q99616 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC12.98□□□□□ -0.33
CCL13Q99616 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CCL13Q99616 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC12.98□□□□□ -0.33
CCL13Q99616 FES-204ENST00000414248 2327 ntTSL 2 BASIC12.97□□□□□ -0.33
CCL13Q99616 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC12.97□□□□□ -0.33
CCL13Q99616 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CCL13Q99616 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CCL13Q99616 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
CCL13Q99616 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC12.97□□□□□ -0.33
CCL13Q99616 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CCL13Q99616 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CCL13Q99616 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC12.97□□□□□ -0.33
CCL13Q99616 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CCL13Q99616 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC12.97□□□□□ -0.33
CCL13Q99616 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CCL13Q99616 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
CCL13Q99616 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CCL13Q99616 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CCL13Q99616 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CCL13Q99616 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC12.97□□□□□ -0.33
CCL13Q99616 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
CCL13Q99616 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC12.97□□□□□ -0.33
CCL13Q99616 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
CCL13Q99616 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
CCL13Q99616 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CCL13Q99616 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
CCL13Q99616 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC12.97□□□□□ -0.33
CCL13Q99616 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CCL13Q99616 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
CCL13Q99616 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC12.97□□□□□ -0.33
CCL13Q99616 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC12.97□□□□□ -0.33
CCL13Q99616 AC098850.1-201ENST00000419919 790 ntBASIC12.97□□□□□ -0.33
CCL13Q99616 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC12.97□□□□□ -0.33
CCL13Q99616 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
CCL13Q99616 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC12.97□□□□□ -0.33
CCL13Q99616 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC12.97□□□□□ -0.33
CCL13Q99616 CRB3P1-201ENST00000449338 276 ntBASIC12.97□□□□□ -0.33
CCL13Q99616 PFN2-205ENST00000461868 613 ntTSL 2 BASIC12.97□□□□□ -0.33
CCL13Q99616 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CCL13Q99616 COX11-202ENST00000571584 1108 ntTSL 2 BASIC12.97□□□□□ -0.33
CCL13Q99616 AC140912.1-201ENST00000577171 1054 ntBASIC12.97□□□□□ -0.33
CCL13Q99616 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
CCL13Q99616 AL662799.1-202ENST00000614205 422 ntBASIC12.97□□□□□ -0.33
CCL13Q99616 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CCL13Q99616 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
CCL13Q99616 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC12.97□□□□□ -0.33
CCL13Q99616 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
CCL13Q99616 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
CCL13Q99616 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC12.97□□□□□ -0.33
CCL13Q99616 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CCL13Q99616 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms