Protein–RNA interactions for Protein: Q96L92

SNX27, Sorting nexin-27, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27Q96L92 AC128714.1-201ENST00000637035 887 ntBASIC16.63■□□□□ 0.25
SNX27Q96L92 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC16.63■□□□□ 0.25
SNX27Q96L92 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SNX27Q96L92 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC16.63■□□□□ 0.25
SNX27Q96L92 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
SNX27Q96L92 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC16.63■□□□□ 0.25
SNX27Q96L92 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC16.63■□□□□ 0.25
SNX27Q96L92 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SNX27Q96L92 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SNX27Q96L92 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC16.63■□□□□ 0.25
SNX27Q96L92 AL158070.2-201ENST00000623713 1621 ntBASIC16.63■□□□□ 0.25
SNX27Q96L92 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC16.62■□□□□ 0.25
SNX27Q96L92 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SNX27Q96L92 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SNX27Q96L92 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
SNX27Q96L92 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
SNX27Q96L92 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SNX27Q96L92 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SNX27Q96L92 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC16.62■□□□□ 0.25
SNX27Q96L92 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SNX27Q96L92 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SNX27Q96L92 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SNX27Q96L92 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SNX27Q96L92 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC16.62■□□□□ 0.25
SNX27Q96L92 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SNX27Q96L92 IGF1-201ENST00000307046 1097 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SNX27Q96L92 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SNX27Q96L92 IGF1-203ENST00000392904 761 ntTSL 5 BASIC16.62■□□□□ 0.25
SNX27Q96L92 AL645937.2-201ENST00000396808 931 ntBASIC16.62■□□□□ 0.25
SNX27Q96L92 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC16.62■□□□□ 0.25
SNX27Q96L92 ACTBP8-201ENST00000403258 1108 ntBASIC16.62■□□□□ 0.25
SNX27Q96L92 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SNX27Q96L92 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC16.62■□□□□ 0.25
SNX27Q96L92 AC114501.1-201ENST00000445949 172 ntBASIC16.62■□□□□ 0.25
SNX27Q96L92 KLF2P4-201ENST00000451959 1225 ntBASIC16.62■□□□□ 0.25
SNX27Q96L92 AC007551.1-201ENST00000457394 519 ntBASIC16.62■□□□□ 0.25
SNX27Q96L92 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC16.62■□□□□ 0.25
SNX27Q96L92 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SNX27Q96L92 KRT90P-201ENST00000549264 1064 ntBASIC16.62■□□□□ 0.25
SNX27Q96L92 AL583810.1-201ENST00000553344 1045 ntBASIC16.62■□□□□ 0.25
SNX27Q96L92 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC16.62■□□□□ 0.25
SNX27Q96L92 TMEM205-216ENST00000593256 792 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SNX27Q96L92 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SNX27Q96L92 TECR-220ENST00000600083 1204 ntTSL 2 BASIC16.62■□□□□ 0.25
SNX27Q96L92 HCG18-245ENST00000602550 559 ntTSL 4 BASIC16.62■□□□□ 0.25
SNX27Q96L92 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC16.62■□□□□ 0.25
SNX27Q96L92 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC16.62■□□□□ 0.25
SNX27Q96L92 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC16.62■□□□□ 0.25
SNX27Q96L92 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SNX27Q96L92 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC16.62■□□□□ 0.25
SNX27Q96L92 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SNX27Q96L92 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
SNX27Q96L92 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
SNX27Q96L92 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
SNX27Q96L92 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SNX27Q96L92 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC16.62■□□□□ 0.25
SNX27Q96L92 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SNX27Q96L92 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SNX27Q96L92 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SNX27Q96L92 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SNX27Q96L92 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC16.62■□□□□ 0.25
SNX27Q96L92 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC16.62■□□□□ 0.25
SNX27Q96L92 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC16.62■□□□□ 0.25
SNX27Q96L92 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SNX27Q96L92 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC16.61■□□□□ 0.25
SNX27Q96L92 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
SNX27Q96L92 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
SNX27Q96L92 AC148477.4-201ENST00000613430 1793 ntBASIC16.61■□□□□ 0.25
SNX27Q96L92 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SNX27Q96L92 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
SNX27Q96L92 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SNX27Q96L92 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC16.61■□□□□ 0.25
SNX27Q96L92 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
SNX27Q96L92 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SNX27Q96L92 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SNX27Q96L92 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SNX27Q96L92 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SNX27Q96L92 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
SNX27Q96L92 AC016694.1-201ENST00000434179 700 ntBASIC16.61■□□□□ 0.25
SNX27Q96L92 RPL7P3-201ENST00000441388 714 ntBASIC16.61■□□□□ 0.25
SNX27Q96L92 AC114812.1-204ENST00000449669 728 ntBASIC16.61■□□□□ 0.25
SNX27Q96L92 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC16.61■□□□□ 0.25
SNX27Q96L92 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC16.61■□□□□ 0.25
SNX27Q96L92 AP000812.2-201ENST00000538934 718 ntBASIC16.61■□□□□ 0.25
SNX27Q96L92 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC16.61■□□□□ 0.25
SNX27Q96L92 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC16.61■□□□□ 0.25
SNX27Q96L92 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC16.61■□□□□ 0.25
SNX27Q96L92 AL021578.1-201ENST00000613646 709 ntBASIC16.61■□□□□ 0.25
SNX27Q96L92 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC16.61■□□□□ 0.25
SNX27Q96L92 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC16.61■□□□□ 0.25
SNX27Q96L92 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SNX27Q96L92 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC16.61■□□□□ 0.25
SNX27Q96L92 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC16.61■□□□□ 0.25
SNX27Q96L92 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC16.61■□□□□ 0.25
SNX27Q96L92 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SNX27Q96L92 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC16.61■□□□□ 0.25
SNX27Q96L92 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC16.61■□□□□ 0.25
SNX27Q96L92 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
SNX27Q96L92 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SNX27Q96L92 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 53.2 ms