Protein–RNA interactions for Protein: Q96HS1

PGAM5, Serine/threonine-protein phosphatase PGAM5, mitochondrial, humanhuman

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGAM5Q96HS1 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC13.63□□□□□ -0.23
PGAM5Q96HS1 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
PGAM5Q96HS1 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
PGAM5Q96HS1 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC13.63□□□□□ -0.23
PGAM5Q96HS1 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
PGAM5Q96HS1 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC13.63□□□□□ -0.23
PGAM5Q96HS1 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
PGAM5Q96HS1 SATB1-217ENST00000493952 626 ntTSL 3 BASIC13.63□□□□□ -0.23
PGAM5Q96HS1 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC13.63□□□□□ -0.23
PGAM5Q96HS1 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC13.63□□□□□ -0.23
PGAM5Q96HS1 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC13.63□□□□□ -0.23
PGAM5Q96HS1 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
PGAM5Q96HS1 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC13.63□□□□□ -0.23
PGAM5Q96HS1 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC13.63□□□□□ -0.23
PGAM5Q96HS1 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC13.63□□□□□ -0.23
PGAM5Q96HS1 AC134684.3-201ENST00000641758 218 ntBASIC13.63□□□□□ -0.23
PGAM5Q96HS1 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
PGAM5Q96HS1 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
PGAM5Q96HS1 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
PGAM5Q96HS1 AC138969.2-201ENST00000532739 9932 ntBASIC13.63□□□□□ -0.23
PGAM5Q96HS1 ZEB1-AS1-208ENST00000607166 2503 ntBASIC13.63□□□□□ -0.23
PGAM5Q96HS1 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC13.63□□□□□ -0.23
PGAM5Q96HS1 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
PGAM5Q96HS1 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
PGAM5Q96HS1 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC13.63□□□□□ -0.23
PGAM5Q96HS1 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
PGAM5Q96HS1 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
PGAM5Q96HS1 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC13.63□□□□□ -0.23
PGAM5Q96HS1 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
PGAM5Q96HS1 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
PGAM5Q96HS1 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
PGAM5Q96HS1 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
PGAM5Q96HS1 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
PGAM5Q96HS1 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
PGAM5Q96HS1 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
PGAM5Q96HS1 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC13.62□□□□□ -0.23
PGAM5Q96HS1 AC084364.1-201ENST00000551967 1556 ntBASIC13.62□□□□□ -0.23
PGAM5Q96HS1 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC13.62□□□□□ -0.23
PGAM5Q96HS1 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
PGAM5Q96HS1 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
PGAM5Q96HS1 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
PGAM5Q96HS1 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
PGAM5Q96HS1 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
PGAM5Q96HS1 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
PGAM5Q96HS1 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC13.62□□□□□ -0.23
PGAM5Q96HS1 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
PGAM5Q96HS1 AMT-224ENST00000635808 1610 ntTSL 5 BASIC13.62□□□□□ -0.23
PGAM5Q96HS1 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
PGAM5Q96HS1 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
PGAM5Q96HS1 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
PGAM5Q96HS1 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
PGAM5Q96HS1 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
PGAM5Q96HS1 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC13.62□□□□□ -0.23
PGAM5Q96HS1 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC13.62□□□□□ -0.23
PGAM5Q96HS1 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
PGAM5Q96HS1 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC13.62□□□□□ -0.23
PGAM5Q96HS1 USP40-206ENST00000443711 628 ntTSL 2 BASIC13.62□□□□□ -0.23
PGAM5Q96HS1 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC13.62□□□□□ -0.23
PGAM5Q96HS1 AP006288.1-201ENST00000446065 395 ntBASIC13.62□□□□□ -0.23
PGAM5Q96HS1 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC13.62□□□□□ -0.23
PGAM5Q96HS1 AC004967.1-201ENST00000453589 447 ntBASIC13.62□□□□□ -0.23
PGAM5Q96HS1 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
PGAM5Q96HS1 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC13.62□□□□□ -0.23
PGAM5Q96HS1 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC13.62□□□□□ -0.23
PGAM5Q96HS1 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC13.62□□□□□ -0.23
PGAM5Q96HS1 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
PGAM5Q96HS1 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC13.62□□□□□ -0.23
PGAM5Q96HS1 AC069262.1-201ENST00000539058 672 ntBASIC13.62□□□□□ -0.23
PGAM5Q96HS1 CALM1-205ENST00000553542 877 ntTSL 5 BASIC13.62□□□□□ -0.23
PGAM5Q96HS1 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC13.62□□□□□ -0.23
PGAM5Q96HS1 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC13.62□□□□□ -0.23
PGAM5Q96HS1 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
PGAM5Q96HS1 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC13.62□□□□□ -0.23
PGAM5Q96HS1 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC13.62□□□□□ -0.23
PGAM5Q96HS1 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC13.62□□□□□ -0.23
PGAM5Q96HS1 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
PGAM5Q96HS1 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC13.62□□□□□ -0.23
PGAM5Q96HS1 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
PGAM5Q96HS1 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC13.62□□□□□ -0.23
PGAM5Q96HS1 TPO-203ENST00000346956 2923 ntTSL 5 BASIC13.62□□□□□ -0.23
PGAM5Q96HS1 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC13.62□□□□□ -0.23
PGAM5Q96HS1 AGAP7P-201ENST00000582299 2062 ntBASIC13.62□□□□□ -0.23
PGAM5Q96HS1 AGAP14-201ENST00000624701 2060 ntBASIC13.62□□□□□ -0.23
PGAM5Q96HS1 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
PGAM5Q96HS1 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC13.62□□□□□ -0.23
PGAM5Q96HS1 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
PGAM5Q96HS1 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC13.62□□□□□ -0.23
PGAM5Q96HS1 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
PGAM5Q96HS1 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC13.62□□□□□ -0.23
PGAM5Q96HS1 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
PGAM5Q96HS1 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC13.62□□□□□ -0.23
PGAM5Q96HS1 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
PGAM5Q96HS1 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
PGAM5Q96HS1 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
PGAM5Q96HS1 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
PGAM5Q96HS1 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
PGAM5Q96HS1 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
PGAM5Q96HS1 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
PGAM5Q96HS1 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
PGAM5Q96HS1 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms