Protein–RNA interactions for Protein: Q96FF9

CDCA5, Sororin, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA5Q96FF9 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC17.81■□□□□ 0.44
CDCA5Q96FF9 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC17.81■□□□□ 0.44
CDCA5Q96FF9 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
CDCA5Q96FF9 TOB1-AS1-201ENST00000416263 1351 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CDCA5Q96FF9 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
CDCA5Q96FF9 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CDCA5Q96FF9 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CDCA5Q96FF9 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
CDCA5Q96FF9 ZNF581-203ENST00000587252 1324 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
CDCA5Q96FF9 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CDCA5Q96FF9 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CDCA5Q96FF9 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CDCA5Q96FF9 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
CDCA5Q96FF9 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC17.8■□□□□ 0.44
CDCA5Q96FF9 CNR1-201ENST00000362094 1252 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CDCA5Q96FF9 RPL3-202ENST00000401609 1289 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CDCA5Q96FF9 AL139339.1-201ENST00000411906 657 ntTSL 2 BASIC17.8■□□□□ 0.44
CDCA5Q96FF9 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC17.8■□□□□ 0.44
CDCA5Q96FF9 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CDCA5Q96FF9 RPS9P1-201ENST00000419943 583 ntBASIC17.8■□□□□ 0.44
CDCA5Q96FF9 SAP30L-203ENST00000440364 792 ntTSL 3 BASIC17.8■□□□□ 0.44
CDCA5Q96FF9 PGAP2-208ENST00000464229 863 ntTSL 3 BASIC17.8■□□□□ 0.44
CDCA5Q96FF9 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC17.8■□□□□ 0.44
CDCA5Q96FF9 PTK2-225ENST00000520892 571 ntTSL 4 BASIC17.8■□□□□ 0.44
CDCA5Q96FF9 POU5F1P2-201ENST00000521750 823 ntBASIC17.8■□□□□ 0.44
CDCA5Q96FF9 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC17.8■□□□□ 0.44
CDCA5Q96FF9 AL845331.2-201ENST00000561882 1044 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
CDCA5Q96FF9 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC17.8■□□□□ 0.44
CDCA5Q96FF9 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC17.8■□□□□ 0.44
CDCA5Q96FF9 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CDCA5Q96FF9 AC111170.1-201ENST00000591110 1132 ntTSL 3 BASIC17.8■□□□□ 0.44
CDCA5Q96FF9 RNASEK-210ENST00000593646 566 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CDCA5Q96FF9 GHRHR-212ENST00000611037 923 ntTSL 5 BASIC17.8■□□□□ 0.44
CDCA5Q96FF9 AC242376.2-201ENST00000619355 883 ntBASIC17.8■□□□□ 0.44
CDCA5Q96FF9 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CDCA5Q96FF9 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CDCA5Q96FF9 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CDCA5Q96FF9 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC17.8■□□□□ 0.44
CDCA5Q96FF9 AL596087.1-201ENST00000400979 1969 ntBASIC17.8■□□□□ 0.44
CDCA5Q96FF9 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
CDCA5Q96FF9 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC17.8■□□□□ 0.44
CDCA5Q96FF9 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CDCA5Q96FF9 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
CDCA5Q96FF9 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC17.8■□□□□ 0.44
CDCA5Q96FF9 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CDCA5Q96FF9 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CDCA5Q96FF9 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
CDCA5Q96FF9 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC17.8■□□□□ 0.44
CDCA5Q96FF9 WAC-202ENST00000347934 2839 ntTSL 5 BASIC17.8■□□□□ 0.44
CDCA5Q96FF9 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
CDCA5Q96FF9 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CDCA5Q96FF9 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CDCA5Q96FF9 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CDCA5Q96FF9 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CDCA5Q96FF9 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
CDCA5Q96FF9 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
CDCA5Q96FF9 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CDCA5Q96FF9 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CDCA5Q96FF9 SERF2-201ENST00000249786 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CDCA5Q96FF9 KLK6-201ENST00000310157 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CDCA5Q96FF9 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC17.79■□□□□ 0.44
CDCA5Q96FF9 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CDCA5Q96FF9 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CDCA5Q96FF9 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CDCA5Q96FF9 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC17.79■□□□□ 0.44
CDCA5Q96FF9 MBLAC2-202ENST00000514906 1936 ntBASIC17.79■□□□□ 0.44
CDCA5Q96FF9 PBDC1-201ENST00000373357 977 ntTSL 2 BASIC17.79■□□□□ 0.44
CDCA5Q96FF9 AL606491.1-201ENST00000412797 483 ntTSL 3 BASIC17.79■□□□□ 0.44
CDCA5Q96FF9 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CDCA5Q96FF9 AGGF1P2-201ENST00000426656 2106 ntBASIC17.79■□□□□ 0.44
CDCA5Q96FF9 AC012360.1-201ENST00000433219 674 ntTSL 5 BASIC17.79■□□□□ 0.44
CDCA5Q96FF9 STUB1-204ENST00000564370 875 ntTSL 2 BASIC17.79■□□□□ 0.44
CDCA5Q96FF9 AC103808.5-201ENST00000577797 462 ntTSL 3 BASIC17.79■□□□□ 0.44
CDCA5Q96FF9 AC018755.3-203ENST00000597710 411 ntTSL 3 BASIC17.79■□□□□ 0.44
CDCA5Q96FF9 GMFG-209ENST00000600322 622 ntTSL 5 BASIC17.79■□□□□ 0.44
CDCA5Q96FF9 AC138894.2-201ENST00000602838 371 ntBASIC17.79■□□□□ 0.44
CDCA5Q96FF9 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC17.79■□□□□ 0.44
CDCA5Q96FF9 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
CDCA5Q96FF9 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC17.79■□□□□ 0.44
CDCA5Q96FF9 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CDCA5Q96FF9 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CDCA5Q96FF9 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
CDCA5Q96FF9 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CDCA5Q96FF9 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CDCA5Q96FF9 FAM90A7P-201ENST00000382628 1395 ntBASIC17.79■□□□□ 0.44
CDCA5Q96FF9 FAM90A23P-201ENST00000400136 1395 ntBASIC17.79■□□□□ 0.44
CDCA5Q96FF9 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC17.79■□□□□ 0.44
CDCA5Q96FF9 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
CDCA5Q96FF9 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CDCA5Q96FF9 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CDCA5Q96FF9 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
CDCA5Q96FF9 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CDCA5Q96FF9 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CDCA5Q96FF9 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC17.78■□□□□ 0.44
CDCA5Q96FF9 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC17.78■□□□□ 0.44
CDCA5Q96FF9 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
CDCA5Q96FF9 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC17.78■□□□□ 0.44
CDCA5Q96FF9 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
CDCA5Q96FF9 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
CDCA5Q96FF9 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC17.78■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 124.1 ms