Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
HPS1Q92902 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC14.33□□□□□ -0.12
HPS1Q92902 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC14.33□□□□□ -0.12
HPS1Q92902 AC005412.3-201ENST00000580309 715 ntBASIC14.33□□□□□ -0.12
HPS1Q92902 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC14.33□□□□□ -0.12
HPS1Q92902 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
HPS1Q92902 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
HPS1Q92902 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
HPS1Q92902 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC14.33□□□□□ -0.12
HPS1Q92902 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC14.33□□□□□ -0.12
HPS1Q92902 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
HPS1Q92902 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
HPS1Q92902 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
HPS1Q92902 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
HPS1Q92902 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
HPS1Q92902 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
HPS1Q92902 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC14.33□□□□□ -0.12
HPS1Q92902 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC14.33□□□□□ -0.12
HPS1Q92902 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
HPS1Q92902 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
HPS1Q92902 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC14.32□□□□□ -0.12
HPS1Q92902 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
HPS1Q92902 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC14.32□□□□□ -0.12
HPS1Q92902 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
HPS1Q92902 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC14.32□□□□□ -0.12
HPS1Q92902 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC14.32□□□□□ -0.12
HPS1Q92902 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HPS1Q92902 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
HPS1Q92902 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC14.32□□□□□ -0.12
HPS1Q92902 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
HPS1Q92902 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HPS1Q92902 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
HPS1Q92902 MAP7-204ENST00000454590 3119 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
HPS1Q92902 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
HPS1Q92902 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
HPS1Q92902 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HPS1Q92902 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HPS1Q92902 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HPS1Q92902 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC14.32□□□□□ -0.12
HPS1Q92902 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC14.32□□□□□ -0.12
HPS1Q92902 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC14.32□□□□□ -0.12
HPS1Q92902 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HPS1Q92902 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
HPS1Q92902 CXCL1P1-201ENST00000502804 216 ntBASIC14.32□□□□□ -0.12
HPS1Q92902 AC091167.2-201ENST00000579581 588 ntBASIC14.32□□□□□ -0.12
HPS1Q92902 AL078644.1-201ENST00000609881 752 ntBASIC14.32□□□□□ -0.12
HPS1Q92902 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
HPS1Q92902 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC14.32□□□□□ -0.12
HPS1Q92902 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC14.32□□□□□ -0.12
HPS1Q92902 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HPS1Q92902 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HPS1Q92902 REM2-202ENST00000536884 1331 ntTSL 2 BASIC14.32□□□□□ -0.12
HPS1Q92902 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
HPS1Q92902 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HPS1Q92902 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC14.32□□□□□ -0.12
HPS1Q92902 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
HPS1Q92902 TOP3BP1-201ENST00000420768 1380 ntBASIC14.32□□□□□ -0.12
HPS1Q92902 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC14.32□□□□□ -0.12
HPS1Q92902 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC14.32□□□□□ -0.12
HPS1Q92902 GDPD5-201ENST00000336898 3523 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HPS1Q92902 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
HPS1Q92902 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
HPS1Q92902 CSNK1A1P1-201ENST00000430593 2147 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
HPS1Q92902 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
HPS1Q92902 KRT8P49-201ENST00000604166 1432 ntBASIC14.32□□□□□ -0.12
HPS1Q92902 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HPS1Q92902 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HPS1Q92902 TRPV6-201ENST00000359396 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
HPS1Q92902 KCTD7-201ENST00000275532 4795 ntTSL 4 BASIC14.31□□□□□ -0.12
HPS1Q92902 FAM156A-221ENST00000622447 3757 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
HPS1Q92902 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HPS1Q92902 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HPS1Q92902 LINC01271-201ENST00000441214 2250 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
HPS1Q92902 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC14.31□□□□□ -0.12
HPS1Q92902 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC14.31□□□□□ -0.12
HPS1Q92902 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HPS1Q92902 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
HPS1Q92902 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HPS1Q92902 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
HPS1Q92902 STK3-201ENST00000419617 2826 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HPS1Q92902 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC14.31□□□□□ -0.12
HPS1Q92902 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HPS1Q92902 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
HPS1Q92902 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
HPS1Q92902 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HPS1Q92902 KLRF1-201ENST00000279545 1091 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
HPS1Q92902 CD82-202ENST00000342935 967 ntTSL 5 BASIC14.31□□□□□ -0.12
HPS1Q92902 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
HPS1Q92902 PON3-203ENST00000427422 894 ntTSL 3 BASIC14.31□□□□□ -0.12
HPS1Q92902 HMGN1P19-201ENST00000436976 333 ntBASIC14.31□□□□□ -0.12
HPS1Q92902 METTL21AP1-201ENST00000438852 635 ntBASIC14.31□□□□□ -0.12
HPS1Q92902 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC14.31□□□□□ -0.12
HPS1Q92902 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC14.31□□□□□ -0.12
HPS1Q92902 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC14.31□□□□□ -0.12
HPS1Q92902 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC14.31□□□□□ -0.12
HPS1Q92902 OR7E47P-204ENST00000575924 449 ntBASIC14.31□□□□□ -0.12
HPS1Q92902 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC14.31□□□□□ -0.12
HPS1Q92902 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC14.31□□□□□ -0.12
HPS1Q92902 RN7SL121P-201ENST00000584223 273 ntBASIC14.31□□□□□ -0.12
HPS1Q92902 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC14.31□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms