Protein–RNA interactions for Protein: Q8WVI0

SMIM4, Small integral membrane protein 4, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4Q8WVI0 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
SMIM4Q8WVI0 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
SMIM4Q8WVI0 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
SMIM4Q8WVI0 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC13.28□□□□□ -0.28
SMIM4Q8WVI0 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC13.28□□□□□ -0.28
SMIM4Q8WVI0 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
SMIM4Q8WVI0 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
SMIM4Q8WVI0 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SMIM4Q8WVI0 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
SMIM4Q8WVI0 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
SMIM4Q8WVI0 AL136982.4-201ENST00000437689 1740 ntBASIC13.27□□□□□ -0.28
SMIM4Q8WVI0 SRC-202ENST00000373558 4304 ntTSL 5 BASIC13.27□□□□□ -0.28
SMIM4Q8WVI0 AC055811.4-201ENST00000624039 1754 ntBASIC13.27□□□□□ -0.28
SMIM4Q8WVI0 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
SMIM4Q8WVI0 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
SMIM4Q8WVI0 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
SMIM4Q8WVI0 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC13.27□□□□□ -0.28
SMIM4Q8WVI0 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC13.27□□□□□ -0.28
SMIM4Q8WVI0 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC13.27□□□□□ -0.28
SMIM4Q8WVI0 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
SMIM4Q8WVI0 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC13.27□□□□□ -0.28
SMIM4Q8WVI0 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.28
SMIM4Q8WVI0 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
SMIM4Q8WVI0 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC13.27□□□□□ -0.29
SMIM4Q8WVI0 DGCR9-201ENST00000609630 2415 ntBASIC13.27□□□□□ -0.29
SMIM4Q8WVI0 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
SMIM4Q8WVI0 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC13.27□□□□□ -0.29
SMIM4Q8WVI0 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
SMIM4Q8WVI0 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
SMIM4Q8WVI0 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
SMIM4Q8WVI0 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
SMIM4Q8WVI0 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC13.27□□□□□ -0.29
SMIM4Q8WVI0 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC13.27□□□□□ -0.29
SMIM4Q8WVI0 ATP5G2P1-201ENST00000433580 426 ntBASIC13.27□□□□□ -0.29
SMIM4Q8WVI0 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC13.27□□□□□ -0.29
SMIM4Q8WVI0 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC13.27□□□□□ -0.29
SMIM4Q8WVI0 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC13.27□□□□□ -0.29
SMIM4Q8WVI0 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC13.27□□□□□ -0.29
SMIM4Q8WVI0 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC13.27□□□□□ -0.29
SMIM4Q8WVI0 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC13.27□□□□□ -0.29
SMIM4Q8WVI0 SERF2-217ENST00000630046 862 ntTSL 5 BASIC13.27□□□□□ -0.29
SMIM4Q8WVI0 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC13.27□□□□□ -0.29
SMIM4Q8WVI0 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC13.27□□□□□ -0.29
SMIM4Q8WVI0 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
SMIM4Q8WVI0 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC13.27□□□□□ -0.29
SMIM4Q8WVI0 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
SMIM4Q8WVI0 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC13.27□□□□□ -0.29
SMIM4Q8WVI0 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
SMIM4Q8WVI0 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC13.27□□□□□ -0.29
SMIM4Q8WVI0 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC13.27□□□□□ -0.29
SMIM4Q8WVI0 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
SMIM4Q8WVI0 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
SMIM4Q8WVI0 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
SMIM4Q8WVI0 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
SMIM4Q8WVI0 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
SMIM4Q8WVI0 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
SMIM4Q8WVI0 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
SMIM4Q8WVI0 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC13.27□□□□□ -0.29
SMIM4Q8WVI0 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC13.27□□□□□ -0.29
SMIM4Q8WVI0 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
SMIM4Q8WVI0 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC13.26□□□□□ -0.29
SMIM4Q8WVI0 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
SMIM4Q8WVI0 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
SMIM4Q8WVI0 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
SMIM4Q8WVI0 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC13.26□□□□□ -0.29
SMIM4Q8WVI0 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SMIM4Q8WVI0 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC13.26□□□□□ -0.29
SMIM4Q8WVI0 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC13.26□□□□□ -0.29
SMIM4Q8WVI0 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC13.26□□□□□ -0.29
SMIM4Q8WVI0 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
SMIM4Q8WVI0 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SMIM4Q8WVI0 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
SMIM4Q8WVI0 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
SMIM4Q8WVI0 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SMIM4Q8WVI0 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
SMIM4Q8WVI0 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
SMIM4Q8WVI0 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
SMIM4Q8WVI0 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC13.26□□□□□ -0.29
SMIM4Q8WVI0 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
SMIM4Q8WVI0 HIST2H3DP1-201ENST00000401004 416 ntBASIC13.26□□□□□ -0.29
SMIM4Q8WVI0 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
SMIM4Q8WVI0 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
SMIM4Q8WVI0 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
SMIM4Q8WVI0 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC13.26□□□□□ -0.29
SMIM4Q8WVI0 PRSS29P-201ENST00000440800 595 ntBASIC13.26□□□□□ -0.29
SMIM4Q8WVI0 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC13.26□□□□□ -0.29
SMIM4Q8WVI0 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC13.26□□□□□ -0.29
SMIM4Q8WVI0 TPT1P11-201ENST00000458482 498 ntBASIC13.26□□□□□ -0.29
SMIM4Q8WVI0 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC13.26□□□□□ -0.29
SMIM4Q8WVI0 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC13.26□□□□□ -0.29
SMIM4Q8WVI0 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
SMIM4Q8WVI0 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC13.26□□□□□ -0.29
SMIM4Q8WVI0 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC13.26□□□□□ -0.29
SMIM4Q8WVI0 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SMIM4Q8WVI0 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC13.26□□□□□ -0.29
SMIM4Q8WVI0 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC13.26□□□□□ -0.29
SMIM4Q8WVI0 COQ9-214ENST00000567933 882 ntTSL 3 BASIC13.26□□□□□ -0.29
SMIM4Q8WVI0 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
SMIM4Q8WVI0 CD7-202ENST00000578509 925 ntTSL 3 BASIC13.26□□□□□ -0.29
SMIM4Q8WVI0 AC005593.1-201ENST00000624894 515 ntBASIC13.26□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms