Protein–RNA interactions for Protein: Q8WV60

PTCD2, Pentatricopeptide repeat-containing protein 2, mitochondrial, humanhuman

Known RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2Q8WV60 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
PTCD2Q8WV60 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC15.79■□□□□ 0.12
PTCD2Q8WV60 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
PTCD2Q8WV60 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PTCD2Q8WV60 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PTCD2Q8WV60 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
PTCD2Q8WV60 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PTCD2Q8WV60 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
PTCD2Q8WV60 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC15.79■□□□□ 0.12
PTCD2Q8WV60 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC15.79■□□□□ 0.12
PTCD2Q8WV60 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
PTCD2Q8WV60 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PTCD2Q8WV60 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC15.79■□□□□ 0.12
PTCD2Q8WV60 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PTCD2Q8WV60 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
PTCD2Q8WV60 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PTCD2Q8WV60 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC15.78■□□□□ 0.12
PTCD2Q8WV60 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC15.78■□□□□ 0.12
PTCD2Q8WV60 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC15.78■□□□□ 0.12
PTCD2Q8WV60 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PTCD2Q8WV60 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PTCD2Q8WV60 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PTCD2Q8WV60 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PTCD2Q8WV60 AL117339.1-201ENST00000419779 428 ntTSL 2 BASIC15.78■□□□□ 0.12
PTCD2Q8WV60 MTND2P11-201ENST00000423638 648 ntBASIC15.78■□□□□ 0.12
PTCD2Q8WV60 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC15.78■□□□□ 0.12
PTCD2Q8WV60 GSAP-205ENST00000430584 600 ntTSL 5 BASIC15.78■□□□□ 0.12
PTCD2Q8WV60 PNKD-204ENST00000436005 978 ntTSL 5 BASIC15.78■□□□□ 0.12
PTCD2Q8WV60 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC15.78■□□□□ 0.12
PTCD2Q8WV60 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC15.78■□□□□ 0.12
PTCD2Q8WV60 USP40-206ENST00000443711 628 ntTSL 2 BASIC15.78■□□□□ 0.12
PTCD2Q8WV60 TAF8-206ENST00000472818 719 ntTSL 2 BASIC15.78■□□□□ 0.12
PTCD2Q8WV60 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
PTCD2Q8WV60 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC15.78■□□□□ 0.12
PTCD2Q8WV60 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC15.78■□□□□ 0.12
PTCD2Q8WV60 AC009652.1-201ENST00000528326 648 ntTSL 5 BASIC15.78■□□□□ 0.12
PTCD2Q8WV60 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC15.78■□□□□ 0.12
PTCD2Q8WV60 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC15.78■□□□□ 0.12
PTCD2Q8WV60 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PTCD2Q8WV60 AC190387.1-201ENST00000551683 408 ntBASIC15.78■□□□□ 0.12
PTCD2Q8WV60 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC15.78■□□□□ 0.12
PTCD2Q8WV60 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PTCD2Q8WV60 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC15.78■□□□□ 0.12
PTCD2Q8WV60 AC009118.2-201ENST00000613275 655 ntBASIC15.78■□□□□ 0.12
PTCD2Q8WV60 AP000720.1-201ENST00000625091 483 ntBASIC15.78■□□□□ 0.12
PTCD2Q8WV60 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PTCD2Q8WV60 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
PTCD2Q8WV60 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC15.78■□□□□ 0.12
PTCD2Q8WV60 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PTCD2Q8WV60 PARN-202ENST00000420015 2360 ntTSL 2 BASIC15.78■□□□□ 0.12
PTCD2Q8WV60 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC15.78■□□□□ 0.12
PTCD2Q8WV60 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC15.78■□□□□ 0.12
PTCD2Q8WV60 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC15.78■□□□□ 0.12
PTCD2Q8WV60 AC084364.1-201ENST00000551967 1556 ntBASIC15.78■□□□□ 0.12
PTCD2Q8WV60 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC15.78■□□□□ 0.12
PTCD2Q8WV60 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC15.78■□□□□ 0.12
PTCD2Q8WV60 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PTCD2Q8WV60 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PTCD2Q8WV60 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
PTCD2Q8WV60 AC148477.4-201ENST00000613430 1793 ntBASIC15.77■□□□□ 0.12
PTCD2Q8WV60 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
PTCD2Q8WV60 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
PTCD2Q8WV60 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC15.77■□□□□ 0.12
PTCD2Q8WV60 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC15.77■□□□□ 0.12
PTCD2Q8WV60 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
PTCD2Q8WV60 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
PTCD2Q8WV60 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC15.77■□□□□ 0.12
PTCD2Q8WV60 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
PTCD2Q8WV60 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
PTCD2Q8WV60 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
PTCD2Q8WV60 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
PTCD2Q8WV60 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
PTCD2Q8WV60 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC15.77■□□□□ 0.12
PTCD2Q8WV60 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
PTCD2Q8WV60 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
PTCD2Q8WV60 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
PTCD2Q8WV60 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
PTCD2Q8WV60 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
PTCD2Q8WV60 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
PTCD2Q8WV60 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
PTCD2Q8WV60 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC15.77■□□□□ 0.12
PTCD2Q8WV60 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC15.77■□□□□ 0.12
PTCD2Q8WV60 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC15.77■□□□□ 0.12
PTCD2Q8WV60 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC15.77■□□□□ 0.12
PTCD2Q8WV60 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC15.77■□□□□ 0.12
PTCD2Q8WV60 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC15.77■□□□□ 0.12
PTCD2Q8WV60 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC15.77■□□□□ 0.12
PTCD2Q8WV60 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC15.77■□□□□ 0.12
PTCD2Q8WV60 AC019227.1-201ENST00000526902 510 ntBASIC15.77■□□□□ 0.12
PTCD2Q8WV60 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC15.77■□□□□ 0.12
PTCD2Q8WV60 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC15.77■□□□□ 0.12
PTCD2Q8WV60 LINC01477-201ENST00000566101 1226 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
PTCD2Q8WV60 AC092337.1-201ENST00000568699 1129 ntBASIC15.77■□□□□ 0.12
PTCD2Q8WV60 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC15.77■□□□□ 0.12
PTCD2Q8WV60 AC025048.3-201ENST00000590609 569 ntBASIC15.77■□□□□ 0.12
PTCD2Q8WV60 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
PTCD2Q8WV60 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC15.77■□□□□ 0.12
PTCD2Q8WV60 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC15.77■□□□□ 0.12
PTCD2Q8WV60 AC005702.4-201ENST00000618393 416 ntBASIC15.77■□□□□ 0.12
PTCD2Q8WV60 SYNJ2BP-COX16-205ENST00000621525 929 ntAPPRIS P2 TSL 2 BASIC15.77■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms