Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 GCSHP3-201ENST00000431120 391 ntBASIC10.11□□□□□ -0.79
ALMS1Q8TCU4 CDC23-208ENST00000505120 455 ntTSL 3 BASIC10.11□□□□□ -0.79
ALMS1Q8TCU4 TMEM98-205ENST00000578289 806 ntTSL 3 BASIC10.11□□□□□ -0.79
ALMS1Q8TCU4 AC009884.2-201ENST00000603110 324 ntBASIC10.11□□□□□ -0.79
ALMS1Q8TCU4 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
ALMS1Q8TCU4 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
ALMS1Q8TCU4 SCAMP1-AS1-201ENST00000421004 1479 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
ALMS1Q8TCU4 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC10.11□□□□□ -0.79
ALMS1Q8TCU4 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC10.11□□□□□ -0.79
ALMS1Q8TCU4 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC10.11□□□□□ -0.79
ALMS1Q8TCU4 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC10.11□□□□□ -0.79
ALMS1Q8TCU4 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC10.1□□□□□ -0.79
ALMS1Q8TCU4 PSME2-201ENST00000216802 1404 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
ALMS1Q8TCU4 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC10.1□□□□□ -0.79
ALMS1Q8TCU4 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
ALMS1Q8TCU4 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
ALMS1Q8TCU4 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
ALMS1Q8TCU4 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
ALMS1Q8TCU4 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
ALMS1Q8TCU4 AC006058.4-201ENST00000624016 1670 ntBASIC10.1□□□□□ -0.79
ALMS1Q8TCU4 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
ALMS1Q8TCU4 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
ALMS1Q8TCU4 TMSB15A-201ENST00000289373 685 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
ALMS1Q8TCU4 DIO1-203ENST00000388876 606 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
ALMS1Q8TCU4 AC254562.2-201ENST00000428786 667 ntTSL 3 BASIC10.1□□□□□ -0.79
ALMS1Q8TCU4 AL135901.1-201ENST00000451812 333 ntBASIC10.1□□□□□ -0.79
ALMS1Q8TCU4 RPP40-203ENST00000464646 1042 ntTSL 5 BASIC10.1□□□□□ -0.79
ALMS1Q8TCU4 DIO1-204ENST00000524406 626 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
ALMS1Q8TCU4 DIO1-213ENST00000532493 406 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
ALMS1Q8TCU4 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC10.1□□□□□ -0.79
ALMS1Q8TCU4 FAM192A-218ENST00000567439 1086 ntAPPRIS P1 TSL 2 BASIC10.1□□□□□ -0.79
ALMS1Q8TCU4 AC103808.3-201ENST00000579714 598 ntTSL 5 BASIC10.1□□□□□ -0.79
ALMS1Q8TCU4 TMEM144-209ENST00000509278 1633 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
ALMS1Q8TCU4 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC10.1□□□□□ -0.79
ALMS1Q8TCU4 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC10.1□□□□□ -0.79
ALMS1Q8TCU4 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC10.1□□□□□ -0.79
ALMS1Q8TCU4 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC10.1□□□□□ -0.79
ALMS1Q8TCU4 AC084018.2-201ENST00000613093 2607 ntBASIC10.1□□□□□ -0.79
ALMS1Q8TCU4 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
ALMS1Q8TCU4 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC10.1□□□□□ -0.79
ALMS1Q8TCU4 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
ALMS1Q8TCU4 AC006449.5-201ENST00000610658 2098 ntBASIC10.1□□□□□ -0.79
ALMS1Q8TCU4 PLAC9P1-201ENST00000397540 389 ntTSL 2 BASIC10.1□□□□□ -0.79
ALMS1Q8TCU4 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC10.1□□□□□ -0.79
ALMS1Q8TCU4 LINC01278-201ENST00000433061 529 ntTSL 3 BASIC10.1□□□□□ -0.79
ALMS1Q8TCU4 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
ALMS1Q8TCU4 LINC01278-206ENST00000610088 554 ntTSL 4 BASIC10.1□□□□□ -0.79
ALMS1Q8TCU4 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC10.1□□□□□ -0.79
ALMS1Q8TCU4 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC10.1□□□□□ -0.79
ALMS1Q8TCU4 CYP4F23P-201ENST00000593402 1579 ntBASIC10.1□□□□□ -0.79
ALMS1Q8TCU4 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
ALMS1Q8TCU4 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC10.1□□□□□ -0.79
ALMS1Q8TCU4 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
ALMS1Q8TCU4 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
ALMS1Q8TCU4 IL23A-201ENST00000228534 1046 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
ALMS1Q8TCU4 OR2R1P-201ENST00000441404 914 ntBASIC10.1□□□□□ -0.79
ALMS1Q8TCU4 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC10.1□□□□□ -0.79
ALMS1Q8TCU4 PRB3-202ENST00000538488 1283 ntAPPRIS P5 TSL 5 BASIC10.1□□□□□ -0.79
ALMS1Q8TCU4 AC008050.1-201ENST00000554926 632 ntTSL 3 BASIC10.1□□□□□ -0.79
ALMS1Q8TCU4 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC10.1□□□□□ -0.79
ALMS1Q8TCU4 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
ALMS1Q8TCU4 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC10.1□□□□□ -0.79
ALMS1Q8TCU4 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
ALMS1Q8TCU4 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC10.1□□□□□ -0.79
ALMS1Q8TCU4 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
ALMS1Q8TCU4 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC10.09□□□□□ -0.79
ALMS1Q8TCU4 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC10.09□□□□□ -0.79
ALMS1Q8TCU4 SLC13A3-205ENST00000417157 876 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
ALMS1Q8TCU4 AC084030.1-201ENST00000455068 561 ntTSL 4 BASIC10.09□□□□□ -0.79
ALMS1Q8TCU4 AC007952.4-201ENST00000573866 637 ntBASIC10.09□□□□□ -0.79
ALMS1Q8TCU4 MIR6769A-201ENST00000617340 73 ntBASIC10.09□□□□□ -0.79
ALMS1Q8TCU4 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC10.09□□□□□ -0.79
ALMS1Q8TCU4 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC10.09□□□□□ -0.79
ALMS1Q8TCU4 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
ALMS1Q8TCU4 AC009090.5-201ENST00000624886 2285 ntBASIC10.09□□□□□ -0.79
ALMS1Q8TCU4 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
ALMS1Q8TCU4 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC10.09□□□□□ -0.79
ALMS1Q8TCU4 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
ALMS1Q8TCU4 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC10.09□□□□□ -0.79
ALMS1Q8TCU4 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
ALMS1Q8TCU4 TMEM177-202ENST00000401466 1346 ntAPPRIS P1 TSL 2 BASIC10.09□□□□□ -0.79
ALMS1Q8TCU4 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC10.09□□□□□ -0.79
ALMS1Q8TCU4 BTBD8-201ENST00000342818 1412 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
ALMS1Q8TCU4 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
ALMS1Q8TCU4 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC10.09□□□□□ -0.79
ALMS1Q8TCU4 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC10.09□□□□□ -0.79
ALMS1Q8TCU4 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
ALMS1Q8TCU4 SLC50A1-202ENST00000368401 1166 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
ALMS1Q8TCU4 PLAC9-203ENST00000372270 534 ntAPPRIS ALT2 TSL 2 BASIC10.09□□□□□ -0.79
ALMS1Q8TCU4 AL451105.2-201ENST00000413763 1234 ntTSL 5 BASIC10.09□□□□□ -0.79
ALMS1Q8TCU4 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC10.09□□□□□ -0.79
ALMS1Q8TCU4 HIGD1A-203ENST00000430190 741 ntTSL 2 BASIC10.09□□□□□ -0.79
ALMS1Q8TCU4 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC10.09□□□□□ -0.79
ALMS1Q8TCU4 AC145207.3-201ENST00000576784 529 ntTSL 5 BASIC10.09□□□□□ -0.79
ALMS1Q8TCU4 AL136040.2-201ENST00000618431 1130 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
ALMS1Q8TCU4 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
ALMS1Q8TCU4 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC10.09□□□□□ -0.79
ALMS1Q8TCU4 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
ALMS1Q8TCU4 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC10.09□□□□□ -0.79
ALMS1Q8TCU4 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms