Protein–RNA interactions for Protein: Q8NEP7

KLHDC9, Kelch domain-containing protein 9, humanhuman

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC9Q8NEP7 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
KLHDC9Q8NEP7 AC020916.1-201ENST00000587762 1774 ntBASIC16.81■□□□□ 0.28
KLHDC9Q8NEP7 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
KLHDC9Q8NEP7 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC16.81■□□□□ 0.28
KLHDC9Q8NEP7 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
KLHDC9Q8NEP7 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
KLHDC9Q8NEP7 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
KLHDC9Q8NEP7 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
KLHDC9Q8NEP7 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC16.81■□□□□ 0.28
KLHDC9Q8NEP7 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
KLHDC9Q8NEP7 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
KLHDC9Q8NEP7 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
KLHDC9Q8NEP7 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
KLHDC9Q8NEP7 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
KLHDC9Q8NEP7 INE2-201ENST00000630399 1874 ntBASIC16.8■□□□□ 0.28
KLHDC9Q8NEP7 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC16.8■□□□□ 0.28
KLHDC9Q8NEP7 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
KLHDC9Q8NEP7 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
KLHDC9Q8NEP7 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
KLHDC9Q8NEP7 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
KLHDC9Q8NEP7 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
KLHDC9Q8NEP7 CELA3B-201ENST00000337107 897 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
KLHDC9Q8NEP7 RN7SKP214-201ENST00000364208 315 ntBASIC16.8■□□□□ 0.28
KLHDC9Q8NEP7 CD1E-202ENST00000368155 696 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
KLHDC9Q8NEP7 CD1E-204ENST00000368157 399 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
KLHDC9Q8NEP7 AK6-201ENST00000380818 1183 ntTSL 2 BASIC16.8■□□□□ 0.28
KLHDC9Q8NEP7 LINC01806-201ENST00000436506 765 ntTSL 2 BASIC16.8■□□□□ 0.28
KLHDC9Q8NEP7 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC16.8■□□□□ 0.28
KLHDC9Q8NEP7 CEP164P1-201ENST00000455142 418 ntBASIC16.8■□□□□ 0.28
KLHDC9Q8NEP7 SRSF10-211ENST00000484146 1089 ntTSL 2 BASIC16.8■□□□□ 0.28
KLHDC9Q8NEP7 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC16.8■□□□□ 0.28
KLHDC9Q8NEP7 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC16.8■□□□□ 0.28
KLHDC9Q8NEP7 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
KLHDC9Q8NEP7 LINC01475-201ENST00000548010 766 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
KLHDC9Q8NEP7 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
KLHDC9Q8NEP7 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
KLHDC9Q8NEP7 AL132994.2-201ENST00000603120 687 ntBASIC16.8■□□□□ 0.28
KLHDC9Q8NEP7 AC138696.2-201ENST00000607376 223 ntBASIC16.8■□□□□ 0.28
KLHDC9Q8NEP7 AC006453.1-201ENST00000636037 1257 ntBASIC16.8■□□□□ 0.28
KLHDC9Q8NEP7 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
KLHDC9Q8NEP7 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
KLHDC9Q8NEP7 AC009093.2-202ENST00000620513 2079 ntBASIC16.8■□□□□ 0.28
KLHDC9Q8NEP7 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
KLHDC9Q8NEP7 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
KLHDC9Q8NEP7 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
KLHDC9Q8NEP7 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
KLHDC9Q8NEP7 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC16.8■□□□□ 0.28
KLHDC9Q8NEP7 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
KLHDC9Q8NEP7 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
KLHDC9Q8NEP7 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
KLHDC9Q8NEP7 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC16.8■□□□□ 0.28
KLHDC9Q8NEP7 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC16.8■□□□□ 0.28
KLHDC9Q8NEP7 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC16.8■□□□□ 0.28
KLHDC9Q8NEP7 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC16.8■□□□□ 0.28
KLHDC9Q8NEP7 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
KLHDC9Q8NEP7 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC16.79■□□□□ 0.28
KLHDC9Q8NEP7 E2F3P2-201ENST00000447755 1422 ntBASIC16.79■□□□□ 0.28
KLHDC9Q8NEP7 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
KLHDC9Q8NEP7 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC16.79■□□□□ 0.28
KLHDC9Q8NEP7 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
KLHDC9Q8NEP7 LHFPL3-201ENST00000401970 1378 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
KLHDC9Q8NEP7 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
KLHDC9Q8NEP7 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
KLHDC9Q8NEP7 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
KLHDC9Q8NEP7 AL157414.3-201ENST00000624276 1954 ntBASIC16.79■□□□□ 0.28
KLHDC9Q8NEP7 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC16.79■□□□□ 0.28
KLHDC9Q8NEP7 AC138932.1-201ENST00000534164 6830 ntBASIC16.79■□□□□ 0.28
KLHDC9Q8NEP7 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC16.79■□□□□ 0.28
KLHDC9Q8NEP7 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
KLHDC9Q8NEP7 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC16.79■□□□□ 0.28
KLHDC9Q8NEP7 HLA-J-204ENST00000495278 958 ntBASIC16.79■□□□□ 0.28
KLHDC9Q8NEP7 LY6E-208ENST00000520531 490 ntTSL 2 BASIC16.79■□□□□ 0.28
KLHDC9Q8NEP7 IQSEC3P1-201ENST00000538799 536 ntBASIC16.79■□□□□ 0.28
KLHDC9Q8NEP7 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC16.79■□□□□ 0.28
KLHDC9Q8NEP7 AL031665.1-201ENST00000619766 572 ntTSL 4 BASIC16.79■□□□□ 0.28
KLHDC9Q8NEP7 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
KLHDC9Q8NEP7 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
KLHDC9Q8NEP7 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC16.79■□□□□ 0.28
KLHDC9Q8NEP7 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
KLHDC9Q8NEP7 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
KLHDC9Q8NEP7 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
KLHDC9Q8NEP7 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
KLHDC9Q8NEP7 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC16.79■□□□□ 0.28
KLHDC9Q8NEP7 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC16.79■□□□□ 0.28
KLHDC9Q8NEP7 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
KLHDC9Q8NEP7 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
KLHDC9Q8NEP7 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
KLHDC9Q8NEP7 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
KLHDC9Q8NEP7 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
KLHDC9Q8NEP7 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
KLHDC9Q8NEP7 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
KLHDC9Q8NEP7 MST1L-201ENST00000442552 2185 ntBASIC16.78■□□□□ 0.28
KLHDC9Q8NEP7 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
KLHDC9Q8NEP7 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
KLHDC9Q8NEP7 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC16.78■□□□□ 0.28
KLHDC9Q8NEP7 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
KLHDC9Q8NEP7 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
KLHDC9Q8NEP7 AL603832.2-201ENST00000566195 2125 ntBASIC16.78■□□□□ 0.28
KLHDC9Q8NEP7 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC16.78■□□□□ 0.28
KLHDC9Q8NEP7 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms