Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
HERC6Q8IVU3 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HERC6Q8IVU3 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
HERC6Q8IVU3 AL451042.2-201ENST00000424774 904 ntTSL 2 BASIC16.69■□□□□ 0.26
HERC6Q8IVU3 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HERC6Q8IVU3 SPTLC1P5-201ENST00000450718 252 ntBASIC16.69■□□□□ 0.26
HERC6Q8IVU3 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HERC6Q8IVU3 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC16.69■□□□□ 0.26
HERC6Q8IVU3 ATP6V0CP2-201ENST00000469409 207 ntBASIC16.69■□□□□ 0.26
HERC6Q8IVU3 AC009403.1-204ENST00000469539 597 ntTSL 2 BASIC16.69■□□□□ 0.26
HERC6Q8IVU3 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
HERC6Q8IVU3 FADS2-212ENST00000522639 360 ntTSL 5 BASIC16.69■□□□□ 0.26
HERC6Q8IVU3 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC16.69■□□□□ 0.26
HERC6Q8IVU3 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC16.69■□□□□ 0.26
HERC6Q8IVU3 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC16.69■□□□□ 0.26
HERC6Q8IVU3 FADS2-215ENST00000574708 385 ntTSL 3 BASIC16.69■□□□□ 0.26
HERC6Q8IVU3 AC105105.3-201ENST00000585470 646 ntTSL 5 BASIC16.69■□□□□ 0.26
HERC6Q8IVU3 CROCCP3-204ENST00000590118 574 ntTSL 4 BASIC16.69■□□□□ 0.26
HERC6Q8IVU3 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
HERC6Q8IVU3 Metazoa_SRP.69-201ENST00000615730 281 ntBASIC16.69■□□□□ 0.26
HERC6Q8IVU3 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
HERC6Q8IVU3 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HERC6Q8IVU3 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
HERC6Q8IVU3 FUK-207ENST00000571514 3054 ntTSL 2 BASIC16.69■□□□□ 0.26
HERC6Q8IVU3 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
HERC6Q8IVU3 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HERC6Q8IVU3 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC16.69■□□□□ 0.26
HERC6Q8IVU3 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HERC6Q8IVU3 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC16.69■□□□□ 0.26
HERC6Q8IVU3 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
HERC6Q8IVU3 NFIC-211ENST00000641145 8399 ntBASIC16.69■□□□□ 0.26
HERC6Q8IVU3 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
HERC6Q8IVU3 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
HERC6Q8IVU3 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC16.69■□□□□ 0.26
HERC6Q8IVU3 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
HERC6Q8IVU3 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC16.69■□□□□ 0.26
HERC6Q8IVU3 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
HERC6Q8IVU3 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC16.69■□□□□ 0.26
HERC6Q8IVU3 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
HERC6Q8IVU3 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HERC6Q8IVU3 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC16.68■□□□□ 0.26
HERC6Q8IVU3 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HERC6Q8IVU3 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HERC6Q8IVU3 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HERC6Q8IVU3 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC16.68■□□□□ 0.26
HERC6Q8IVU3 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
HERC6Q8IVU3 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HERC6Q8IVU3 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC16.68■□□□□ 0.26
HERC6Q8IVU3 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC16.68■□□□□ 0.26
HERC6Q8IVU3 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HERC6Q8IVU3 SDCCAG3P2-201ENST00000326105 1023 ntBASIC16.68■□□□□ 0.26
HERC6Q8IVU3 SNX21-203ENST00000372541 771 ntTSL 2 BASIC16.68■□□□□ 0.26
HERC6Q8IVU3 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC16.68■□□□□ 0.26
HERC6Q8IVU3 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HERC6Q8IVU3 MIR33B-201ENST00000385104 96 ntBASIC16.68■□□□□ 0.26
HERC6Q8IVU3 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
HERC6Q8IVU3 NDUFAB1P1-201ENST00000404262 460 ntBASIC16.68■□□□□ 0.26
HERC6Q8IVU3 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC16.68■□□□□ 0.26
HERC6Q8IVU3 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
HERC6Q8IVU3 SERPINA13P-202ENST00000478994 924 ntBASIC16.68■□□□□ 0.26
HERC6Q8IVU3 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC16.68■□□□□ 0.26
HERC6Q8IVU3 RNF41-210ENST00000552244 716 ntTSL 3 BASIC16.68■□□□□ 0.26
HERC6Q8IVU3 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC16.68■□□□□ 0.26
HERC6Q8IVU3 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
HERC6Q8IVU3 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
HERC6Q8IVU3 MIR5572-201ENST00000583188 137 ntBASIC16.68■□□□□ 0.26
HERC6Q8IVU3 UBL5-208ENST00000593087 320 ntTSL 3 BASIC16.68■□□□□ 0.26
HERC6Q8IVU3 KLK11-210ENST00000600362 759 ntTSL 3 BASIC16.68■□□□□ 0.26
HERC6Q8IVU3 SIRT2-219ENST00000613542 1170 ntTSL 5 BASIC16.68■□□□□ 0.26
HERC6Q8IVU3 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC16.68■□□□□ 0.26
HERC6Q8IVU3 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
HERC6Q8IVU3 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
HERC6Q8IVU3 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HERC6Q8IVU3 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HERC6Q8IVU3 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HERC6Q8IVU3 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HERC6Q8IVU3 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HERC6Q8IVU3 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC16.67■□□□□ 0.26
HERC6Q8IVU3 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC16.67■□□□□ 0.26
HERC6Q8IVU3 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC16.67■□□□□ 0.26
HERC6Q8IVU3 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC16.67■□□□□ 0.26
HERC6Q8IVU3 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
HERC6Q8IVU3 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HERC6Q8IVU3 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HERC6Q8IVU3 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HERC6Q8IVU3 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HERC6Q8IVU3 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
HERC6Q8IVU3 AC104457.1-201ENST00000401024 814 ntBASIC16.67■□□□□ 0.26
HERC6Q8IVU3 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC16.67■□□□□ 0.26
HERC6Q8IVU3 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC16.67■□□□□ 0.26
HERC6Q8IVU3 MAGEA5-201ENST00000446757 942 ntBASIC16.67■□□□□ 0.26
HERC6Q8IVU3 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC16.67■□□□□ 0.26
HERC6Q8IVU3 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC16.67■□□□□ 0.26
HERC6Q8IVU3 AC106738.2-201ENST00000559802 557 ntTSL 4 BASIC16.67■□□□□ 0.26
HERC6Q8IVU3 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC16.67■□□□□ 0.26
HERC6Q8IVU3 AC008736.2-201ENST00000587554 516 ntTSL 2 BASIC16.67■□□□□ 0.26
HERC6Q8IVU3 TBCB-211ENST00000589996 724 ntTSL 3 BASIC16.67■□□□□ 0.26
HERC6Q8IVU3 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC16.67■□□□□ 0.26
HERC6Q8IVU3 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC16.67■□□□□ 0.26
HERC6Q8IVU3 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 63 ms