Protein–RNA interactions for Protein: Q8IV77

CNGA4, Cyclic nucleotide-gated cation channel alpha-4, humanhuman

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA4Q8IV77 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CNGA4Q8IV77 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CNGA4Q8IV77 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CNGA4Q8IV77 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC16.86■□□□□ 0.29
CNGA4Q8IV77 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
CNGA4Q8IV77 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CNGA4Q8IV77 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC16.86■□□□□ 0.29
CNGA4Q8IV77 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC16.86■□□□□ 0.29
CNGA4Q8IV77 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC16.86■□□□□ 0.29
CNGA4Q8IV77 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
CNGA4Q8IV77 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CNGA4Q8IV77 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC16.85■□□□□ 0.29
CNGA4Q8IV77 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CNGA4Q8IV77 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CNGA4Q8IV77 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CNGA4Q8IV77 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC16.85■□□□□ 0.29
CNGA4Q8IV77 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CNGA4Q8IV77 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC16.85■□□□□ 0.29
CNGA4Q8IV77 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC16.85■□□□□ 0.29
CNGA4Q8IV77 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CNGA4Q8IV77 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC16.85■□□□□ 0.29
CNGA4Q8IV77 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CNGA4Q8IV77 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CNGA4Q8IV77 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
CNGA4Q8IV77 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CNGA4Q8IV77 SPDYE17-201ENST00000412399 783 ntBASIC16.85■□□□□ 0.29
CNGA4Q8IV77 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC16.85■□□□□ 0.29
CNGA4Q8IV77 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC16.85■□□□□ 0.29
CNGA4Q8IV77 MED15P5-201ENST00000423150 992 ntBASIC16.85■□□□□ 0.29
CNGA4Q8IV77 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC16.85■□□□□ 0.29
CNGA4Q8IV77 HIST3H2BA-201ENST00000436555 524 ntBASIC16.85■□□□□ 0.29
CNGA4Q8IV77 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC16.85■□□□□ 0.29
CNGA4Q8IV77 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC16.85■□□□□ 0.29
CNGA4Q8IV77 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
CNGA4Q8IV77 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC16.85■□□□□ 0.29
CNGA4Q8IV77 COX5A-206ENST00000568783 571 ntTSL 3 BASIC16.85■□□□□ 0.29
CNGA4Q8IV77 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC16.85■□□□□ 0.29
CNGA4Q8IV77 AC027601.4-201ENST00000611259 610 ntBASIC16.85■□□□□ 0.29
CNGA4Q8IV77 AC055717.3-201ENST00000622967 595 ntBASIC16.85■□□□□ 0.29
CNGA4Q8IV77 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
CNGA4Q8IV77 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC16.85■□□□□ 0.29
CNGA4Q8IV77 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
CNGA4Q8IV77 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC16.85■□□□□ 0.29
CNGA4Q8IV77 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CNGA4Q8IV77 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
CNGA4Q8IV77 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CNGA4Q8IV77 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CNGA4Q8IV77 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC16.85■□□□□ 0.29
CNGA4Q8IV77 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC16.85■□□□□ 0.29
CNGA4Q8IV77 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
CNGA4Q8IV77 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
CNGA4Q8IV77 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CNGA4Q8IV77 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CNGA4Q8IV77 AC012508.2-201ENST00000567613 1472 ntBASIC16.85■□□□□ 0.29
CNGA4Q8IV77 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
CNGA4Q8IV77 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CNGA4Q8IV77 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC16.85■□□□□ 0.29
CNGA4Q8IV77 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CNGA4Q8IV77 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CNGA4Q8IV77 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC16.85■□□□□ 0.29
CNGA4Q8IV77 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC16.85■□□□□ 0.29
CNGA4Q8IV77 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CNGA4Q8IV77 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CNGA4Q8IV77 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC16.84■□□□□ 0.29
CNGA4Q8IV77 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC16.84■□□□□ 0.29
CNGA4Q8IV77 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CNGA4Q8IV77 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CNGA4Q8IV77 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
CNGA4Q8IV77 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CNGA4Q8IV77 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CNGA4Q8IV77 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
CNGA4Q8IV77 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CNGA4Q8IV77 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
CNGA4Q8IV77 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CNGA4Q8IV77 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
CNGA4Q8IV77 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
CNGA4Q8IV77 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CNGA4Q8IV77 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC16.84■□□□□ 0.29
CNGA4Q8IV77 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC16.84■□□□□ 0.29
CNGA4Q8IV77 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC16.84■□□□□ 0.29
CNGA4Q8IV77 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC16.84■□□□□ 0.29
CNGA4Q8IV77 AC140113.2-201ENST00000604370 208 ntBASIC16.84■□□□□ 0.29
CNGA4Q8IV77 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC16.84■□□□□ 0.29
CNGA4Q8IV77 FAM197Y3-203ENST00000618346 717 ntBASIC16.84■□□□□ 0.29
CNGA4Q8IV77 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC16.84■□□□□ 0.29
CNGA4Q8IV77 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC16.84■□□□□ 0.29
CNGA4Q8IV77 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC16.84■□□□□ 0.29
CNGA4Q8IV77 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CNGA4Q8IV77 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CNGA4Q8IV77 IL9RP2-201ENST00000423948 1312 ntBASIC16.84■□□□□ 0.29
CNGA4Q8IV77 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC16.84■□□□□ 0.29
CNGA4Q8IV77 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC16.84■□□□□ 0.29
CNGA4Q8IV77 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
CNGA4Q8IV77 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CNGA4Q8IV77 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
CNGA4Q8IV77 SBF1P1-201ENST00000444527 5631 ntBASIC16.84■□□□□ 0.29
CNGA4Q8IV77 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC16.84■□□□□ 0.29
CNGA4Q8IV77 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CNGA4Q8IV77 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CNGA4Q8IV77 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms