Protein–RNA interactions for Protein: Q86XW9

NME9, Thioredoxin domain-containing protein 6, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NME9Q86XW9 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
NME9Q86XW9 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC20.63■□□□□ 0.89
NME9Q86XW9 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NME9Q86XW9 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NME9Q86XW9 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NME9Q86XW9 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC20.63■□□□□ 0.89
NME9Q86XW9 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NME9Q86XW9 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
NME9Q86XW9 SLC25A24P2-201ENST00000415059 510 ntBASIC20.63■□□□□ 0.89
NME9Q86XW9 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC20.63■□□□□ 0.89
NME9Q86XW9 NKAIN1P1-201ENST00000435754 582 ntBASIC20.63■□□□□ 0.89
NME9Q86XW9 AC044849.1-201ENST00000519737 1188 ntBASIC20.63■□□□□ 0.89
NME9Q86XW9 AC126915.1-201ENST00000522847 1038 ntBASIC20.63■□□□□ 0.89
NME9Q86XW9 ADM-202ENST00000524948 584 ntTSL 2 BASIC20.63■□□□□ 0.89
NME9Q86XW9 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
NME9Q86XW9 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC20.63■□□□□ 0.89
NME9Q86XW9 AC020914.3-201ENST00000594712 304 ntBASIC20.63■□□□□ 0.89
NME9Q86XW9 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC20.63■□□□□ 0.89
NME9Q86XW9 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC20.63■□□□□ 0.89
NME9Q86XW9 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NME9Q86XW9 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NME9Q86XW9 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC20.63■□□□□ 0.89
NME9Q86XW9 DKFZP434H168-201ENST00000567381 1905 ntBASIC20.63■□□□□ 0.89
NME9Q86XW9 ZBTB45P1-201ENST00000452761 1456 ntBASIC20.62■□□□□ 0.89
NME9Q86XW9 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC20.62■□□□□ 0.89
NME9Q86XW9 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC20.62■□□□□ 0.89
NME9Q86XW9 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC20.62■□□□□ 0.89
NME9Q86XW9 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC20.62■□□□□ 0.89
NME9Q86XW9 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NME9Q86XW9 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC20.62■□□□□ 0.89
NME9Q86XW9 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
NME9Q86XW9 AL365203.3-201ENST00000609742 2057 ntBASIC20.62■□□□□ 0.89
NME9Q86XW9 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NME9Q86XW9 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
NME9Q86XW9 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC20.62■□□□□ 0.89
NME9Q86XW9 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC20.62■□□□□ 0.89
NME9Q86XW9 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NME9Q86XW9 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC20.62■□□□□ 0.89
NME9Q86XW9 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC20.62■□□□□ 0.89
NME9Q86XW9 MESTP3-201ENST00000503460 968 ntBASIC20.62■□□□□ 0.89
NME9Q86XW9 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC20.62■□□□□ 0.89
NME9Q86XW9 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
NME9Q86XW9 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC20.62■□□□□ 0.89
NME9Q86XW9 ARL16-210ENST00000574938 751 ntTSL 2 BASIC20.62■□□□□ 0.89
NME9Q86XW9 MIR4683-201ENST00000579659 81 ntBASIC20.62■□□□□ 0.89
NME9Q86XW9 AC007663.3-201ENST00000609632 465 ntBASIC20.62■□□□□ 0.89
NME9Q86XW9 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC20.62■□□□□ 0.89
NME9Q86XW9 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
NME9Q86XW9 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
NME9Q86XW9 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC20.62■□□□□ 0.89
NME9Q86XW9 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NME9Q86XW9 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC20.62■□□□□ 0.89
NME9Q86XW9 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NME9Q86XW9 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
NME9Q86XW9 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NME9Q86XW9 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NME9Q86XW9 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC20.62■□□□□ 0.89
NME9Q86XW9 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NME9Q86XW9 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC20.62■□□□□ 0.89
NME9Q86XW9 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC20.61■□□□□ 0.89
NME9Q86XW9 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
NME9Q86XW9 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
NME9Q86XW9 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
NME9Q86XW9 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
NME9Q86XW9 REXO1L4P-201ENST00000605109 1937 ntBASIC20.61■□□□□ 0.89
NME9Q86XW9 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
NME9Q86XW9 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC20.61■□□□□ 0.89
NME9Q86XW9 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
NME9Q86XW9 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
NME9Q86XW9 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC20.61■□□□□ 0.89
NME9Q86XW9 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC20.61■□□□□ 0.89
NME9Q86XW9 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC20.61■□□□□ 0.89
NME9Q86XW9 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
NME9Q86XW9 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
NME9Q86XW9 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC20.61■□□□□ 0.89
NME9Q86XW9 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC20.61■□□□□ 0.89
NME9Q86XW9 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
NME9Q86XW9 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
NME9Q86XW9 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
NME9Q86XW9 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
NME9Q86XW9 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
NME9Q86XW9 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
NME9Q86XW9 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
NME9Q86XW9 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
NME9Q86XW9 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC20.61■□□□□ 0.89
NME9Q86XW9 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC20.6■□□□□ 0.89
NME9Q86XW9 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC20.6■□□□□ 0.89
NME9Q86XW9 INE2-201ENST00000630399 1874 ntBASIC20.6■□□□□ 0.89
NME9Q86XW9 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
NME9Q86XW9 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC20.6■□□□□ 0.89
NME9Q86XW9 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
NME9Q86XW9 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
NME9Q86XW9 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
NME9Q86XW9 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC20.6■□□□□ 0.89
NME9Q86XW9 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
NME9Q86XW9 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
NME9Q86XW9 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
NME9Q86XW9 AC016700.1-201ENST00000429424 312 ntBASIC20.6■□□□□ 0.89
NME9Q86XW9 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC20.6■□□□□ 0.89
NME9Q86XW9 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms