Protein–RNA interactions for Protein: Q86UE6

LRRTM1, Leucine-rich repeat transmembrane neuronal protein 1, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1Q86UE6 SLC9A7P1-202ENST00000556476 2239 ntBASIC13.48□□□□□ -0.25
LRRTM1Q86UE6 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
LRRTM1Q86UE6 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
LRRTM1Q86UE6 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC13.48□□□□□ -0.25
LRRTM1Q86UE6 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
LRRTM1Q86UE6 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
LRRTM1Q86UE6 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
LRRTM1Q86UE6 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
LRRTM1Q86UE6 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC13.48□□□□□ -0.25
LRRTM1Q86UE6 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC13.48□□□□□ -0.25
LRRTM1Q86UE6 AC027601.5-201ENST00000624065 2482 ntBASIC13.48□□□□□ -0.25
LRRTM1Q86UE6 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC13.48□□□□□ -0.25
LRRTM1Q86UE6 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC13.48□□□□□ -0.25
LRRTM1Q86UE6 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
LRRTM1Q86UE6 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
LRRTM1Q86UE6 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
LRRTM1Q86UE6 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
LRRTM1Q86UE6 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
LRRTM1Q86UE6 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
LRRTM1Q86UE6 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
LRRTM1Q86UE6 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
LRRTM1Q86UE6 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
LRRTM1Q86UE6 AC243562.1-201ENST00000560672 389 ntBASIC13.48□□□□□ -0.25
LRRTM1Q86UE6 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC13.48□□□□□ -0.25
LRRTM1Q86UE6 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
LRRTM1Q86UE6 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
LRRTM1Q86UE6 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
LRRTM1Q86UE6 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
LRRTM1Q86UE6 AC113367.3-201ENST00000508316 1912 ntBASIC13.48□□□□□ -0.25
LRRTM1Q86UE6 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC13.48□□□□□ -0.25
LRRTM1Q86UE6 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC13.48□□□□□ -0.25
LRRTM1Q86UE6 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
LRRTM1Q86UE6 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
LRRTM1Q86UE6 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
LRRTM1Q86UE6 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC13.48□□□□□ -0.25
LRRTM1Q86UE6 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
LRRTM1Q86UE6 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
LRRTM1Q86UE6 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC13.48□□□□□ -0.25
LRRTM1Q86UE6 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC13.48□□□□□ -0.25
LRRTM1Q86UE6 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
LRRTM1Q86UE6 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
LRRTM1Q86UE6 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
LRRTM1Q86UE6 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC13.47□□□□□ -0.25
LRRTM1Q86UE6 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
LRRTM1Q86UE6 AC097359.2-201ENST00000604992 2389 ntBASIC13.47□□□□□ -0.25
LRRTM1Q86UE6 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
LRRTM1Q86UE6 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC13.47□□□□□ -0.25
LRRTM1Q86UE6 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
LRRTM1Q86UE6 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC13.47□□□□□ -0.25
LRRTM1Q86UE6 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
LRRTM1Q86UE6 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
LRRTM1Q86UE6 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
LRRTM1Q86UE6 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC13.47□□□□□ -0.25
LRRTM1Q86UE6 TKT-201ENST00000296289 1931 ntTSL 5 BASIC13.47□□□□□ -0.25
LRRTM1Q86UE6 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
LRRTM1Q86UE6 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC13.47□□□□□ -0.25
LRRTM1Q86UE6 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
LRRTM1Q86UE6 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC13.47□□□□□ -0.25
LRRTM1Q86UE6 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
LRRTM1Q86UE6 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
LRRTM1Q86UE6 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
LRRTM1Q86UE6 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
LRRTM1Q86UE6 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
LRRTM1Q86UE6 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
LRRTM1Q86UE6 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC13.47□□□□□ -0.25
LRRTM1Q86UE6 BEX3-201ENST00000361298 921 ntTSL 2 BASIC13.47□□□□□ -0.25
LRRTM1Q86UE6 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
LRRTM1Q86UE6 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC13.47□□□□□ -0.25
LRRTM1Q86UE6 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
LRRTM1Q86UE6 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
LRRTM1Q86UE6 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC13.47□□□□□ -0.25
LRRTM1Q86UE6 SPCS2P4-201ENST00000436160 681 ntBASIC13.47□□□□□ -0.25
LRRTM1Q86UE6 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC13.47□□□□□ -0.25
LRRTM1Q86UE6 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
LRRTM1Q86UE6 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
LRRTM1Q86UE6 RNF34-208ENST00000555076 593 ntTSL 3 BASIC13.47□□□□□ -0.25
LRRTM1Q86UE6 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
LRRTM1Q86UE6 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC13.47□□□□□ -0.25
LRRTM1Q86UE6 CMC2-214ENST00000565925 640 ntTSL 5 BASIC13.47□□□□□ -0.25
LRRTM1Q86UE6 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC13.47□□□□□ -0.25
LRRTM1Q86UE6 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC13.47□□□□□ -0.25
LRRTM1Q86UE6 SLC25A6P4-201ENST00000586535 553 ntBASIC13.47□□□□□ -0.25
LRRTM1Q86UE6 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
LRRTM1Q86UE6 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC13.47□□□□□ -0.25
LRRTM1Q86UE6 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC13.47□□□□□ -0.25
LRRTM1Q86UE6 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC13.47□□□□□ -0.25
LRRTM1Q86UE6 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
LRRTM1Q86UE6 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
LRRTM1Q86UE6 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
LRRTM1Q86UE6 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
LRRTM1Q86UE6 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
LRRTM1Q86UE6 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
LRRTM1Q86UE6 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC13.47□□□□□ -0.25
LRRTM1Q86UE6 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
LRRTM1Q86UE6 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
LRRTM1Q86UE6 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC13.47□□□□□ -0.25
LRRTM1Q86UE6 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
LRRTM1Q86UE6 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC13.47□□□□□ -0.25
LRRTM1Q86UE6 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
LRRTM1Q86UE6 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC13.47□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 65.2 ms