Protein–RNA interactions for Protein: Q7Z7G8

VPS13B, Vacuolar protein sorting-associated protein 13B, humanhuman

Predictions only

Length 4,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13BQ7Z7G8 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC9.31□□□□□ -0.92
VPS13BQ7Z7G8 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
VPS13BQ7Z7G8 BID-213ENST00000615414 2236 ntTSL 5 BASIC9.31□□□□□ -0.92
VPS13BQ7Z7G8 MIR557-201ENST00000385239 98 ntBASIC9.31□□□□□ -0.92
VPS13BQ7Z7G8 ACTBP8-201ENST00000403258 1108 ntBASIC9.31□□□□□ -0.92
VPS13BQ7Z7G8 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC9.31□□□□□ -0.92
VPS13BQ7Z7G8 AL008733.1-201ENST00000440516 469 ntTSL 3 BASIC9.31□□□□□ -0.92
VPS13BQ7Z7G8 RNMTL1P1-201ENST00000454103 560 ntBASIC9.31□□□□□ -0.92
VPS13BQ7Z7G8 PPP2R1A-209ENST00000477989 444 ntTSL 3 BASIC9.31□□□□□ -0.92
VPS13BQ7Z7G8 RN7SL67P-201ENST00000492147 296 ntBASIC9.31□□□□□ -0.92
VPS13BQ7Z7G8 AC022616.1-201ENST00000518688 554 ntBASIC9.31□□□□□ -0.92
VPS13BQ7Z7G8 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC9.31□□□□□ -0.92
VPS13BQ7Z7G8 C2orf69P1-201ENST00000563532 1093 ntBASIC9.31□□□□□ -0.92
VPS13BQ7Z7G8 ZSCAN10-205ENST00000572548 618 ntTSL 3 BASIC9.31□□□□□ -0.92
VPS13BQ7Z7G8 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC9.31□□□□□ -0.92
VPS13BQ7Z7G8 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC9.31□□□□□ -0.92
VPS13BQ7Z7G8 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC9.31□□□□□ -0.92
VPS13BQ7Z7G8 AL137783.1-201ENST00000623494 1896 ntBASIC9.31□□□□□ -0.92
VPS13BQ7Z7G8 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC9.31□□□□□ -0.92
VPS13BQ7Z7G8 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC9.31□□□□□ -0.92
VPS13BQ7Z7G8 AC132872.4-202ENST00000622924 2756 ntBASIC9.31□□□□□ -0.92
VPS13BQ7Z7G8 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
VPS13BQ7Z7G8 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC9.31□□□□□ -0.92
VPS13BQ7Z7G8 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
VPS13BQ7Z7G8 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC9.31□□□□□ -0.92
VPS13BQ7Z7G8 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
VPS13BQ7Z7G8 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC9.31□□□□□ -0.92
VPS13BQ7Z7G8 AC020910.5-201ENST00000623668 1865 ntBASIC9.31□□□□□ -0.92
VPS13BQ7Z7G8 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC9.31□□□□□ -0.92
VPS13BQ7Z7G8 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC9.31□□□□□ -0.92
VPS13BQ7Z7G8 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
VPS13BQ7Z7G8 SPACA3-201ENST00000269053 817 ntAPPRIS P2 TSL 1 (best) BASIC9.31□□□□□ -0.92
VPS13BQ7Z7G8 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC9.31□□□□□ -0.92
VPS13BQ7Z7G8 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC9.31□□□□□ -0.92
VPS13BQ7Z7G8 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC9.31□□□□□ -0.92
VPS13BQ7Z7G8 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC9.31□□□□□ -0.92
VPS13BQ7Z7G8 AC069208.1-205ENST00000456299 576 ntTSL 4 BASIC9.31□□□□□ -0.92
VPS13BQ7Z7G8 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC9.31□□□□□ -0.92
VPS13BQ7Z7G8 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
VPS13BQ7Z7G8 AC027237.1-201ENST00000560942 655 ntBASIC9.31□□□□□ -0.92
VPS13BQ7Z7G8 SHBG-207ENST00000570547 801 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
VPS13BQ7Z7G8 SPACA3-205ENST00000580599 949 ntAPPRIS ALT2 TSL 1 (best) BASIC9.31□□□□□ -0.92
VPS13BQ7Z7G8 TOMM7-207ENST00000621567 241 ntAPPRIS ALT1 TSL 5 BASIC9.31□□□□□ -0.92
VPS13BQ7Z7G8 AC074138.1-201ENST00000611182 1303 ntBASIC9.31□□□□□ -0.92
VPS13BQ7Z7G8 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC9.31□□□□□ -0.92
VPS13BQ7Z7G8 AC013726.1-201ENST00000563747 2285 ntBASIC9.3□□□□□ -0.92
VPS13BQ7Z7G8 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
VPS13BQ7Z7G8 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
VPS13BQ7Z7G8 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
VPS13BQ7Z7G8 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC9.3□□□□□ -0.92
VPS13BQ7Z7G8 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
VPS13BQ7Z7G8 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
VPS13BQ7Z7G8 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC9.3□□□□□ -0.92
VPS13BQ7Z7G8 AL118508.1-202ENST00000411595 709 ntTSL 2 BASIC9.3□□□□□ -0.92
VPS13BQ7Z7G8 LINC01006-202ENST00000418309 640 ntTSL 3 BASIC9.3□□□□□ -0.92
VPS13BQ7Z7G8 PSMA1-202ENST00000418988 1266 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
VPS13BQ7Z7G8 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC9.3□□□□□ -0.92
VPS13BQ7Z7G8 SOX9-AS1-207ENST00000446332 443 ntTSL 2 BASIC9.3□□□□□ -0.92
VPS13BQ7Z7G8 AC005696.1-201ENST00000572876 443 ntTSL 2 BASIC9.3□□□□□ -0.92
VPS13BQ7Z7G8 HKR1-225ENST00000592168 566 ntTSL 4 BASIC9.3□□□□□ -0.92
VPS13BQ7Z7G8 NAP1L6-202ENST00000641404 1222 ntBASIC9.3□□□□□ -0.92
VPS13BQ7Z7G8 Z98259.2-201ENST00000641583 609 ntBASIC9.3□□□□□ -0.92
VPS13BQ7Z7G8 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC9.3□□□□□ -0.92
VPS13BQ7Z7G8 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC9.3□□□□□ -0.92
VPS13BQ7Z7G8 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
VPS13BQ7Z7G8 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
VPS13BQ7Z7G8 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC9.3□□□□□ -0.92
VPS13BQ7Z7G8 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
VPS13BQ7Z7G8 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC9.3□□□□□ -0.92
VPS13BQ7Z7G8 AL365203.3-201ENST00000609742 2057 ntBASIC9.3□□□□□ -0.92
VPS13BQ7Z7G8 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
VPS13BQ7Z7G8 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
VPS13BQ7Z7G8 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC9.3□□□□□ -0.92
VPS13BQ7Z7G8 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC9.3□□□□□ -0.92
VPS13BQ7Z7G8 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
VPS13BQ7Z7G8 MIR4435-2HG-204ENST00000419736 777 ntTSL 3 BASIC9.3□□□□□ -0.92
VPS13BQ7Z7G8 EIF3FP3-201ENST00000434851 1086 ntBASIC9.3□□□□□ -0.92
VPS13BQ7Z7G8 ANXA5-210ENST00000515017 1190 ntTSL 5 BASIC9.3□□□□□ -0.92
VPS13BQ7Z7G8 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC9.3□□□□□ -0.92
VPS13BQ7Z7G8 ZNF586-204ENST00000598183 603 ntTSL 5 BASIC9.3□□□□□ -0.92
VPS13BQ7Z7G8 AC005632.3-201ENST00000605544 308 ntBASIC9.3□□□□□ -0.92
VPS13BQ7Z7G8 AC002472.4-201ENST00000641915 272 ntBASIC9.3□□□□□ -0.92
VPS13BQ7Z7G8 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC9.3□□□□□ -0.92
VPS13BQ7Z7G8 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC9.3□□□□□ -0.92
VPS13BQ7Z7G8 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC9.3□□□□□ -0.92
VPS13BQ7Z7G8 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
VPS13BQ7Z7G8 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC9.3□□□□□ -0.92
VPS13BQ7Z7G8 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
VPS13BQ7Z7G8 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC9.3□□□□□ -0.92
VPS13BQ7Z7G8 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
VPS13BQ7Z7G8 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
VPS13BQ7Z7G8 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC9.3□□□□□ -0.92
VPS13BQ7Z7G8 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC9.3□□□□□ -0.92
VPS13BQ7Z7G8 KLK6-201ENST00000310157 1511 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
VPS13BQ7Z7G8 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
VPS13BQ7Z7G8 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
VPS13BQ7Z7G8 ANKRD30BP2-201ENST00000435744 1610 ntBASIC9.3□□□□□ -0.92
VPS13BQ7Z7G8 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
VPS13BQ7Z7G8 SLC16A6P1-201ENST00000413214 1059 ntBASIC9.3□□□□□ -0.92
VPS13BQ7Z7G8 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC9.3□□□□□ -0.92
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms