Protein–RNA interactions for Protein: Q643R3

LPCAT4, Lysophospholipid acyltransferase LPCAT4, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4Q643R3 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
LPCAT4Q643R3 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC14.66□□□□□ -0.06
LPCAT4Q643R3 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
LPCAT4Q643R3 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
LPCAT4Q643R3 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
LPCAT4Q643R3 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
LPCAT4Q643R3 CATSPERE-201ENST00000366531 3038 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
LPCAT4Q643R3 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC14.65□□□□□ -0.06
LPCAT4Q643R3 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
LPCAT4Q643R3 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC14.65□□□□□ -0.06
LPCAT4Q643R3 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
LPCAT4Q643R3 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC14.65□□□□□ -0.06
LPCAT4Q643R3 AC073439.1-201ENST00000624121 1774 ntBASIC14.65□□□□□ -0.06
LPCAT4Q643R3 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
LPCAT4Q643R3 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
LPCAT4Q643R3 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
LPCAT4Q643R3 NUTM2HP-201ENST00000442076 2498 ntBASIC14.65□□□□□ -0.06
LPCAT4Q643R3 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
LPCAT4Q643R3 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
LPCAT4Q643R3 CNTN1-203ENST00000547702 3033 ntTSL 2 BASIC14.65□□□□□ -0.06
LPCAT4Q643R3 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
LPCAT4Q643R3 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
LPCAT4Q643R3 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC14.65□□□□□ -0.06
LPCAT4Q643R3 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
LPCAT4Q643R3 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC14.65□□□□□ -0.06
LPCAT4Q643R3 DUSP5P1-201ENST00000441325 1139 ntBASIC14.65□□□□□ -0.06
LPCAT4Q643R3 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC14.65□□□□□ -0.06
LPCAT4Q643R3 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
LPCAT4Q643R3 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
LPCAT4Q643R3 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC14.65□□□□□ -0.06
LPCAT4Q643R3 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
LPCAT4Q643R3 RPS15P9-201ENST00000494093 319 ntBASIC14.65□□□□□ -0.06
LPCAT4Q643R3 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC14.65□□□□□ -0.06
LPCAT4Q643R3 QPRT-203ENST00000562473 579 ntTSL 3 BASIC14.65□□□□□ -0.06
LPCAT4Q643R3 AC012615.1-201ENST00000565797 1299 ntBASIC14.65□□□□□ -0.06
LPCAT4Q643R3 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC14.65□□□□□ -0.06
LPCAT4Q643R3 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
LPCAT4Q643R3 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
LPCAT4Q643R3 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
LPCAT4Q643R3 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC14.65□□□□□ -0.06
LPCAT4Q643R3 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
LPCAT4Q643R3 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
LPCAT4Q643R3 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC14.65□□□□□ -0.06
LPCAT4Q643R3 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
LPCAT4Q643R3 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
LPCAT4Q643R3 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC14.65□□□□□ -0.06
LPCAT4Q643R3 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
LPCAT4Q643R3 AL122018.1-201ENST00000446607 2310 ntBASIC14.65□□□□□ -0.06
LPCAT4Q643R3 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
LPCAT4Q643R3 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
LPCAT4Q643R3 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
LPCAT4Q643R3 AL512306.2-201ENST00000444037 2219 ntTSL 2 BASIC14.65□□□□□ -0.06
LPCAT4Q643R3 AC023090.2-201ENST00000625182 2110 ntBASIC14.65□□□□□ -0.06
LPCAT4Q643R3 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
LPCAT4Q643R3 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
LPCAT4Q643R3 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
LPCAT4Q643R3 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
LPCAT4Q643R3 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC14.65□□□□□ -0.07
LPCAT4Q643R3 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LPCAT4Q643R3 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
LPCAT4Q643R3 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
LPCAT4Q643R3 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC14.64□□□□□ -0.07
LPCAT4Q643R3 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
LPCAT4Q643R3 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC14.64□□□□□ -0.07
LPCAT4Q643R3 LINC01782-201ENST00000591212 2908 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
LPCAT4Q643R3 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LPCAT4Q643R3 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LPCAT4Q643R3 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
LPCAT4Q643R3 AC093668.2-201ENST00000481893 3569 ntTSL 2 BASIC14.64□□□□□ -0.07
LPCAT4Q643R3 AC105052.1-201ENST00000519541 3569 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
LPCAT4Q643R3 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
LPCAT4Q643R3 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC14.64□□□□□ -0.07
LPCAT4Q643R3 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LPCAT4Q643R3 FAM200B-201ENST00000422728 2962 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LPCAT4Q643R3 CSNK1A1P1-201ENST00000430593 2147 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
LPCAT4Q643R3 KRT16P4-201ENST00000453883 522 ntBASIC14.64□□□□□ -0.07
LPCAT4Q643R3 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC14.64□□□□□ -0.07
LPCAT4Q643R3 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC14.64□□□□□ -0.07
LPCAT4Q643R3 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC14.64□□□□□ -0.07
LPCAT4Q643R3 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC14.64□□□□□ -0.07
LPCAT4Q643R3 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LPCAT4Q643R3 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC14.64□□□□□ -0.07
LPCAT4Q643R3 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC14.64□□□□□ -0.07
LPCAT4Q643R3 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC14.64□□□□□ -0.07
LPCAT4Q643R3 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC14.64□□□□□ -0.07
LPCAT4Q643R3 GPR88-201ENST00000315033 3491 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LPCAT4Q643R3 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
LPCAT4Q643R3 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC14.64□□□□□ -0.07
LPCAT4Q643R3 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LPCAT4Q643R3 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
LPCAT4Q643R3 TSPEAR-AS2-202ENST00000354333 2422 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
LPCAT4Q643R3 SF1-209ENST00000433274 2317 ntTSL 2 BASIC14.64□□□□□ -0.07
LPCAT4Q643R3 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LPCAT4Q643R3 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LPCAT4Q643R3 SPOCD1-201ENST00000257100 2472 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
LPCAT4Q643R3 KLHL34-201ENST00000379499 3641 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
LPCAT4Q643R3 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
LPCAT4Q643R3 ALOX15B-201ENST00000380173 2605 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
LPCAT4Q643R3 USP4-203ENST00000415188 1454 ntTSL 3 BASIC14.63□□□□□ -0.07
LPCAT4Q643R3 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC14.63□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms