Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 AC010328.2-201ENST00000597698 1111 ntBASIC16.37■□□□□ 0.21
VARS2Q5ST30 AC244093.1-201ENST00000610837 814 ntBASIC16.37■□□□□ 0.21
VARS2Q5ST30 AC132938.4-201ENST00000623835 848 ntBASIC16.37■□□□□ 0.21
VARS2Q5ST30 PRSS30P-206ENST00000641773 873 ntBASIC16.37■□□□□ 0.21
VARS2Q5ST30 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
VARS2Q5ST30 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC16.37■□□□□ 0.21
VARS2Q5ST30 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC16.37■□□□□ 0.21
VARS2Q5ST30 AC007787.1-201ENST00000588095 1583 ntBASIC16.37■□□□□ 0.21
VARS2Q5ST30 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
VARS2Q5ST30 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
VARS2Q5ST30 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
VARS2Q5ST30 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC16.37■□□□□ 0.21
VARS2Q5ST30 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
VARS2Q5ST30 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
VARS2Q5ST30 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
VARS2Q5ST30 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
VARS2Q5ST30 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
VARS2Q5ST30 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
VARS2Q5ST30 AC009090.5-201ENST00000624886 2285 ntBASIC16.36■□□□□ 0.21
VARS2Q5ST30 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
VARS2Q5ST30 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC16.36■□□□□ 0.21
VARS2Q5ST30 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
VARS2Q5ST30 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
VARS2Q5ST30 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
VARS2Q5ST30 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
VARS2Q5ST30 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC16.36■□□□□ 0.21
VARS2Q5ST30 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC16.36■□□□□ 0.21
VARS2Q5ST30 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC16.36■□□□□ 0.21
VARS2Q5ST30 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
VARS2Q5ST30 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
VARS2Q5ST30 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
VARS2Q5ST30 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
VARS2Q5ST30 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC16.36■□□□□ 0.21
VARS2Q5ST30 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC16.36■□□□□ 0.21
VARS2Q5ST30 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC16.36■□□□□ 0.21
VARS2Q5ST30 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC16.36■□□□□ 0.21
VARS2Q5ST30 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC16.36■□□□□ 0.21
VARS2Q5ST30 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC16.36■□□□□ 0.21
VARS2Q5ST30 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC16.36■□□□□ 0.21
VARS2Q5ST30 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC16.36■□□□□ 0.21
VARS2Q5ST30 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
VARS2Q5ST30 ZNF331-218ENST00000513265 739 ntTSL 3 BASIC16.36■□□□□ 0.21
VARS2Q5ST30 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC16.36■□□□□ 0.21
VARS2Q5ST30 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC16.36■□□□□ 0.21
VARS2Q5ST30 AC009542.2-202ENST00000619004 1067 ntBASIC16.36■□□□□ 0.21
VARS2Q5ST30 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC16.36■□□□□ 0.21
VARS2Q5ST30 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC16.36■□□□□ 0.21
VARS2Q5ST30 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
VARS2Q5ST30 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
VARS2Q5ST30 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC16.36■□□□□ 0.21
VARS2Q5ST30 LOX-206ENST00000639739 1626 ntTSL 5 BASIC16.36■□□□□ 0.21
VARS2Q5ST30 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
VARS2Q5ST30 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
VARS2Q5ST30 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC16.36■□□□□ 0.21
VARS2Q5ST30 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
VARS2Q5ST30 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
VARS2Q5ST30 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
VARS2Q5ST30 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
VARS2Q5ST30 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC16.35■□□□□ 0.21
VARS2Q5ST30 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
VARS2Q5ST30 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
VARS2Q5ST30 AP005117.1-202ENST00000581724 1908 ntBASIC16.35■□□□□ 0.21
VARS2Q5ST30 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
VARS2Q5ST30 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC16.35■□□□□ 0.21
VARS2Q5ST30 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
VARS2Q5ST30 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC16.35■□□□□ 0.21
VARS2Q5ST30 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
VARS2Q5ST30 AL158070.2-201ENST00000623713 1621 ntBASIC16.35■□□□□ 0.21
VARS2Q5ST30 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
VARS2Q5ST30 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
VARS2Q5ST30 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
VARS2Q5ST30 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
VARS2Q5ST30 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
VARS2Q5ST30 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
VARS2Q5ST30 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC16.35■□□□□ 0.21
VARS2Q5ST30 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC16.35■□□□□ 0.21
VARS2Q5ST30 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC16.35■□□□□ 0.21
VARS2Q5ST30 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
VARS2Q5ST30 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC16.35■□□□□ 0.21
VARS2Q5ST30 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC16.35■□□□□ 0.21
VARS2Q5ST30 AL590640.2-201ENST00000457038 527 ntBASIC16.35■□□□□ 0.21
VARS2Q5ST30 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
VARS2Q5ST30 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
VARS2Q5ST30 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
VARS2Q5ST30 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
VARS2Q5ST30 AC023310.1-201ENST00000554836 735 ntBASIC16.35■□□□□ 0.21
VARS2Q5ST30 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC16.35■□□□□ 0.21
VARS2Q5ST30 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC16.35■□□□□ 0.21
VARS2Q5ST30 TMF1P1-201ENST00000576058 373 ntBASIC16.35■□□□□ 0.21
VARS2Q5ST30 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
VARS2Q5ST30 AC079791.1-201ENST00000605356 973 ntBASIC16.35■□□□□ 0.21
VARS2Q5ST30 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
VARS2Q5ST30 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
VARS2Q5ST30 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
VARS2Q5ST30 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
VARS2Q5ST30 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
VARS2Q5ST30 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC16.35■□□□□ 0.21
VARS2Q5ST30 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
VARS2Q5ST30 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC16.35■□□□□ 0.21
VARS2Q5ST30 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms