Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CCDC58Q4VC31 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CCDC58Q4VC31 NARF-206ENST00000457415 1668 ntTSL 5 BASIC13.95□□□□□ -0.18
CCDC58Q4VC31 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CCDC58Q4VC31 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC13.94□□□□□ -0.18
CCDC58Q4VC31 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
CCDC58Q4VC31 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
CCDC58Q4VC31 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CCDC58Q4VC31 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
CCDC58Q4VC31 SLC22A23-202ENST00000380302 2883 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CCDC58Q4VC31 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CCDC58Q4VC31 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
CCDC58Q4VC31 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CCDC58Q4VC31 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CCDC58Q4VC31 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC13.94□□□□□ -0.18
CCDC58Q4VC31 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CCDC58Q4VC31 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CCDC58Q4VC31 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CCDC58Q4VC31 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CCDC58Q4VC31 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CCDC58Q4VC31 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CCDC58Q4VC31 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CCDC58Q4VC31 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
CCDC58Q4VC31 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
CCDC58Q4VC31 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC13.94□□□□□ -0.18
CCDC58Q4VC31 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
CCDC58Q4VC31 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
CCDC58Q4VC31 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CCDC58Q4VC31 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC13.94□□□□□ -0.18
CCDC58Q4VC31 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC13.94□□□□□ -0.18
CCDC58Q4VC31 AC098831.1-202ENST00000438821 336 ntBASIC13.94□□□□□ -0.18
CCDC58Q4VC31 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC13.94□□□□□ -0.18
CCDC58Q4VC31 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
CCDC58Q4VC31 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC13.94□□□□□ -0.18
CCDC58Q4VC31 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC13.94□□□□□ -0.18
CCDC58Q4VC31 CCDC74BP1-201ENST00000508880 1123 ntBASIC13.94□□□□□ -0.18
CCDC58Q4VC31 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC13.94□□□□□ -0.18
CCDC58Q4VC31 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC13.94□□□□□ -0.18
CCDC58Q4VC31 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
CCDC58Q4VC31 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CCDC58Q4VC31 AC148477.8-201ENST00000624298 468 ntBASIC13.94□□□□□ -0.18
CCDC58Q4VC31 CD99L2-205ENST00000437787 3493 ntTSL 2 BASIC13.94□□□□□ -0.18
CCDC58Q4VC31 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC13.94□□□□□ -0.18
CCDC58Q4VC31 NR3C1-201ENST00000231509 3556 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CCDC58Q4VC31 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CCDC58Q4VC31 ARHGAP10-201ENST00000336498 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CCDC58Q4VC31 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CCDC58Q4VC31 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC13.94□□□□□ -0.18
CCDC58Q4VC31 MAP3K12-203ENST00000547035 2944 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
CCDC58Q4VC31 MBLAC2-202ENST00000514906 1936 ntBASIC13.94□□□□□ -0.18
CCDC58Q4VC31 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CCDC58Q4VC31 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
CCDC58Q4VC31 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
CCDC58Q4VC31 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
CCDC58Q4VC31 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CCDC58Q4VC31 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CCDC58Q4VC31 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC13.93□□□□□ -0.18
CCDC58Q4VC31 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC13.93□□□□□ -0.18
CCDC58Q4VC31 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CCDC58Q4VC31 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
CCDC58Q4VC31 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
CCDC58Q4VC31 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CCDC58Q4VC31 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
CCDC58Q4VC31 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC13.93□□□□□ -0.18
CCDC58Q4VC31 RPL5P21-201ENST00000404620 815 ntBASIC13.93□□□□□ -0.18
CCDC58Q4VC31 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC13.93□□□□□ -0.18
CCDC58Q4VC31 PHKG1P2-201ENST00000457537 863 ntBASIC13.93□□□□□ -0.18
CCDC58Q4VC31 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
CCDC58Q4VC31 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
CCDC58Q4VC31 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC13.93□□□□□ -0.18
CCDC58Q4VC31 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC13.93□□□□□ -0.18
CCDC58Q4VC31 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC13.93□□□□□ -0.18
CCDC58Q4VC31 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC13.93□□□□□ -0.18
CCDC58Q4VC31 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CCDC58Q4VC31 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CCDC58Q4VC31 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC13.93□□□□□ -0.18
CCDC58Q4VC31 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC13.93□□□□□ -0.18
CCDC58Q4VC31 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CCDC58Q4VC31 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC13.93□□□□□ -0.18
CCDC58Q4VC31 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
CCDC58Q4VC31 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CCDC58Q4VC31 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
CCDC58Q4VC31 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
CCDC58Q4VC31 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
CCDC58Q4VC31 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC13.93□□□□□ -0.18
CCDC58Q4VC31 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC13.93□□□□□ -0.18
CCDC58Q4VC31 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC13.93□□□□□ -0.18
CCDC58Q4VC31 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CCDC58Q4VC31 ADCY8-202ENST00000377928 3363 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CCDC58Q4VC31 SFRP1-202ENST00000379845 3873 ntTSL 2 BASIC13.92□□□□□ -0.18
CCDC58Q4VC31 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
CCDC58Q4VC31 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CCDC58Q4VC31 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CCDC58Q4VC31 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC13.92□□□□□ -0.18
CCDC58Q4VC31 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CCDC58Q4VC31 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CCDC58Q4VC31 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CCDC58Q4VC31 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CCDC58Q4VC31 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CCDC58Q4VC31 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 91 ms