Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 AL139384.1-201ENST00000612143 3047 ntBASIC18.35■□□□□ 0.53
PDS5AQ29RF7 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
PDS5AQ29RF7 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
PDS5AQ29RF7 AP000593.2-201ENST00000542775 1433 ntBASIC18.35■□□□□ 0.53
PDS5AQ29RF7 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PDS5AQ29RF7 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PDS5AQ29RF7 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC18.35■□□□□ 0.53
PDS5AQ29RF7 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PDS5AQ29RF7 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PDS5AQ29RF7 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PDS5AQ29RF7 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC18.34■□□□□ 0.53
PDS5AQ29RF7 AP003680.1-201ENST00000598970 3660 ntBASIC18.34■□□□□ 0.53
PDS5AQ29RF7 AL023775.1-201ENST00000454907 1746 ntBASIC18.34■□□□□ 0.53
PDS5AQ29RF7 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
PDS5AQ29RF7 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
PDS5AQ29RF7 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PDS5AQ29RF7 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PDS5AQ29RF7 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
PDS5AQ29RF7 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PDS5AQ29RF7 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PDS5AQ29RF7 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
PDS5AQ29RF7 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PDS5AQ29RF7 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
PDS5AQ29RF7 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC18.34■□□□□ 0.53
PDS5AQ29RF7 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
PDS5AQ29RF7 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC18.34■□□□□ 0.53
PDS5AQ29RF7 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PDS5AQ29RF7 HSPB1P2-201ENST00000448722 546 ntBASIC18.34■□□□□ 0.53
PDS5AQ29RF7 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PDS5AQ29RF7 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC18.34■□□□□ 0.53
PDS5AQ29RF7 AL391280.1-201ENST00000506969 1062 ntBASIC18.34■□□□□ 0.53
PDS5AQ29RF7 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PDS5AQ29RF7 AP006547.1-201ENST00000563435 692 ntBASIC18.34■□□□□ 0.53
PDS5AQ29RF7 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC18.34■□□□□ 0.53
PDS5AQ29RF7 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PDS5AQ29RF7 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC18.34■□□□□ 0.53
PDS5AQ29RF7 AC005695.3-201ENST00000614522 232 ntBASIC18.34■□□□□ 0.53
PDS5AQ29RF7 PRKN-211ENST00000615065 261 ntTSL 5 BASIC18.34■□□□□ 0.53
PDS5AQ29RF7 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PDS5AQ29RF7 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC18.34■□□□□ 0.53
PDS5AQ29RF7 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PDS5AQ29RF7 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
PDS5AQ29RF7 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PDS5AQ29RF7 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PDS5AQ29RF7 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC18.34■□□□□ 0.53
PDS5AQ29RF7 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
PDS5AQ29RF7 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PDS5AQ29RF7 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC18.34■□□□□ 0.53
PDS5AQ29RF7 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC18.34■□□□□ 0.53
PDS5AQ29RF7 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
PDS5AQ29RF7 MROH4P-201ENST00000431302 1578 ntBASIC18.34■□□□□ 0.53
PDS5AQ29RF7 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PDS5AQ29RF7 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PDS5AQ29RF7 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
PDS5AQ29RF7 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PDS5AQ29RF7 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
PDS5AQ29RF7 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC18.34■□□□□ 0.53
PDS5AQ29RF7 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
PDS5AQ29RF7 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
PDS5AQ29RF7 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC18.33■□□□□ 0.53
PDS5AQ29RF7 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
PDS5AQ29RF7 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC18.33■□□□□ 0.53
PDS5AQ29RF7 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
PDS5AQ29RF7 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
PDS5AQ29RF7 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC18.33■□□□□ 0.53
PDS5AQ29RF7 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
PDS5AQ29RF7 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
PDS5AQ29RF7 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
PDS5AQ29RF7 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
PDS5AQ29RF7 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
PDS5AQ29RF7 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
PDS5AQ29RF7 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
PDS5AQ29RF7 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
PDS5AQ29RF7 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
PDS5AQ29RF7 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC18.33■□□□□ 0.53
PDS5AQ29RF7 AL136309.1-201ENST00000403917 691 ntBASIC18.33■□□□□ 0.53
PDS5AQ29RF7 BTBD6P1-201ENST00000412176 1267 ntBASIC18.33■□□□□ 0.53
PDS5AQ29RF7 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC18.33■□□□□ 0.53
PDS5AQ29RF7 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC18.33■□□□□ 0.53
PDS5AQ29RF7 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC18.33■□□□□ 0.53
PDS5AQ29RF7 AC006033.1-201ENST00000440505 426 ntBASIC18.33■□□□□ 0.53
PDS5AQ29RF7 CHMP1AP1-201ENST00000445563 662 ntBASIC18.33■□□□□ 0.53
PDS5AQ29RF7 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC18.33■□□□□ 0.53
PDS5AQ29RF7 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC18.33■□□□□ 0.53
PDS5AQ29RF7 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC18.33■□□□□ 0.53
PDS5AQ29RF7 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC18.33■□□□□ 0.53
PDS5AQ29RF7 APOA2-204ENST00000464492 530 ntTSL 3 BASIC18.33■□□□□ 0.53
PDS5AQ29RF7 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC18.33■□□□□ 0.53
PDS5AQ29RF7 FAM8A2P-201ENST00000528813 1142 ntBASIC18.33■□□□□ 0.53
PDS5AQ29RF7 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC18.33■□□□□ 0.53
PDS5AQ29RF7 EMC4-209ENST00000559421 497 ntTSL 2 BASIC18.33■□□□□ 0.53
PDS5AQ29RF7 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC18.33■□□□□ 0.53
PDS5AQ29RF7 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
PDS5AQ29RF7 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC18.33■□□□□ 0.53
PDS5AQ29RF7 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC18.33■□□□□ 0.53
PDS5AQ29RF7 OR10B1P-201ENST00000601666 907 ntBASIC18.33■□□□□ 0.53
PDS5AQ29RF7 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
PDS5AQ29RF7 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
PDS5AQ29RF7 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
PDS5AQ29RF7 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 82 ms