Protein–RNA interactions for Protein: Q08345

DDR1, Epithelial discoidin domain-containing receptor 1, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1Q08345 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
DDR1Q08345 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC18.92■□□□□ 0.62
DDR1Q08345 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
DDR1Q08345 OR9I1-201ENST00000302610 945 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
DDR1Q08345 ODF4-201ENST00000328248 1156 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
DDR1Q08345 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
DDR1Q08345 LINC01237-201ENST00000415434 573 ntTSL 4 BASIC18.92■□□□□ 0.62
DDR1Q08345 AC022858.1-201ENST00000521685 685 ntTSL 3 BASIC18.92■□□□□ 0.62
DDR1Q08345 FKBP11-212ENST00000552878 1052 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
DDR1Q08345 DUX4L46-201ENST00000566845 751 ntBASIC18.92■□□□□ 0.62
DDR1Q08345 AC137723.1-201ENST00000584705 709 ntTSL 3 BASIC18.92■□□□□ 0.62
DDR1Q08345 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
DDR1Q08345 TPGS2-209ENST00000589049 1102 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
DDR1Q08345 SMIM22-209ENST00000591870 355 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
DDR1Q08345 AC005779.2-201ENST00000593083 550 ntAPPRIS P1 TSL 4 BASIC18.92■□□□□ 0.62
DDR1Q08345 WT1-AS_6.1-201ENST00000614919 121 ntBASIC18.92■□□□□ 0.62
DDR1Q08345 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
DDR1Q08345 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
DDR1Q08345 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
DDR1Q08345 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
DDR1Q08345 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
DDR1Q08345 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
DDR1Q08345 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC18.92■□□□□ 0.62
DDR1Q08345 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
DDR1Q08345 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
DDR1Q08345 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
DDR1Q08345 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
DDR1Q08345 MST1L-201ENST00000442552 2185 ntBASIC18.92■□□□□ 0.62
DDR1Q08345 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
DDR1Q08345 FOXO4-201ENST00000341558 1353 ntTSL 5 BASIC18.92■□□□□ 0.62
DDR1Q08345 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
DDR1Q08345 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC18.91■□□□□ 0.62
DDR1Q08345 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
DDR1Q08345 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
DDR1Q08345 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
DDR1Q08345 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
DDR1Q08345 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
DDR1Q08345 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
DDR1Q08345 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
DDR1Q08345 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC18.91■□□□□ 0.62
DDR1Q08345 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
DDR1Q08345 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
DDR1Q08345 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
DDR1Q08345 DKK4-201ENST00000220812 894 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
DDR1Q08345 IL9-201ENST00000274520 591 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
DDR1Q08345 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
DDR1Q08345 TRO-205ENST00000399736 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
DDR1Q08345 AL109767.1-201ENST00000429450 564 ntTSL 4 BASIC18.91■□□□□ 0.62
DDR1Q08345 CHID1-202ENST00000429789 1289 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
DDR1Q08345 AC078991.1-201ENST00000437297 610 ntBASIC18.91■□□□□ 0.62
DDR1Q08345 HCFC1-AS1-201ENST00000438219 350 ntTSL 3 BASIC18.91■□□□□ 0.62
DDR1Q08345 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC18.91■□□□□ 0.62
DDR1Q08345 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC18.91■□□□□ 0.62
DDR1Q08345 PGAM1P5-201ENST00000548011 764 ntBASIC18.91■□□□□ 0.62
DDR1Q08345 AC011466.3-201ENST00000596563 852 ntTSL 2 BASIC18.91■□□□□ 0.62
DDR1Q08345 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC18.91■□□□□ 0.62
DDR1Q08345 MIR6842-201ENST00000612539 65 ntBASIC18.91■□□□□ 0.62
DDR1Q08345 AC007718.1-201ENST00000621078 280 ntBASIC18.91■□□□□ 0.62
DDR1Q08345 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
DDR1Q08345 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC18.91■□□□□ 0.62
DDR1Q08345 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
DDR1Q08345 ILF3-AS1-201ENST00000591501 1983 ntBASIC18.91■□□□□ 0.62
DDR1Q08345 AL157414.3-201ENST00000624276 1954 ntBASIC18.91■□□□□ 0.62
DDR1Q08345 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
DDR1Q08345 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
DDR1Q08345 PPIL3-201ENST00000286175 1370 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
DDR1Q08345 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
DDR1Q08345 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
DDR1Q08345 LINC02447-202ENST00000501888 2146 ntBASIC18.91■□□□□ 0.62
DDR1Q08345 TBC1D3J-201ENST00000620719 1426 ntBASIC18.91■□□□□ 0.62
DDR1Q08345 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC18.9■□□□□ 0.62
DDR1Q08345 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
DDR1Q08345 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
DDR1Q08345 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
DDR1Q08345 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC18.9■□□□□ 0.62
DDR1Q08345 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
DDR1Q08345 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
DDR1Q08345 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
DDR1Q08345 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC18.9■□□□□ 0.62
DDR1Q08345 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
DDR1Q08345 AK6-201ENST00000380818 1183 ntTSL 2 BASIC18.9■□□□□ 0.62
DDR1Q08345 AL137856.1-201ENST00000429398 773 ntTSL 3 BASIC18.9■□□□□ 0.62
DDR1Q08345 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC18.9■□□□□ 0.62
DDR1Q08345 AC246817.2-203ENST00000517357 569 ntTSL 4 BASIC18.9■□□□□ 0.62
DDR1Q08345 AC246817.2-202ENST00000519393 564 ntTSL 4 BASIC18.9■□□□□ 0.62
DDR1Q08345 TMEM218-205ENST00000527271 706 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
DDR1Q08345 SIRT3-210ENST00000529382 1225 ntTSL 2 BASIC18.9■□□□□ 0.62
DDR1Q08345 LINC01629-201ENST00000553613 581 ntTSL 4 BASIC18.9■□□□□ 0.62
DDR1Q08345 AC133919.1-201ENST00000562203 416 ntTSL 3 BASIC18.9■□□□□ 0.62
DDR1Q08345 PAM16-211ENST00000575848 518 ntTSL 3 BASIC18.9■□□□□ 0.62
DDR1Q08345 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
DDR1Q08345 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC18.9■□□□□ 0.62
DDR1Q08345 NAT9-211ENST00000580632 799 ntTSL 3 BASIC18.9■□□□□ 0.62
DDR1Q08345 IRF3-215ENST00000596822 823 ntTSL 3 BASIC18.9■□□□□ 0.62
DDR1Q08345 CCDC197-205ENST00000636493 1279 ntAPPRIS P5 TSL 5 BASIC18.9■□□□□ 0.62
DDR1Q08345 NAP1L6-202ENST00000641404 1222 ntBASIC18.9■□□□□ 0.62
DDR1Q08345 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
DDR1Q08345 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
DDR1Q08345 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
DDR1Q08345 AC079328.2-201ENST00000561241 3354 ntBASIC18.9■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms