Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
HIST1H1AQ02539 AC041040.2-201ENST00000622926 2899 ntBASIC11.95□□□□□ -0.5
HIST1H1AQ02539 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
HIST1H1AQ02539 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
HIST1H1AQ02539 MYOM3-202ENST00000374434 5804 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
HIST1H1AQ02539 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
HIST1H1AQ02539 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC11.95□□□□□ -0.5
HIST1H1AQ02539 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
HIST1H1AQ02539 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
HIST1H1AQ02539 AL022342.1-201ENST00000400363 863 ntBASIC11.95□□□□□ -0.5
HIST1H1AQ02539 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC11.95□□□□□ -0.5
HIST1H1AQ02539 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC11.95□□□□□ -0.5
HIST1H1AQ02539 AC142381.1-201ENST00000426099 345 ntBASIC11.95□□□□□ -0.5
HIST1H1AQ02539 SPCS2P4-201ENST00000436160 681 ntBASIC11.95□□□□□ -0.5
HIST1H1AQ02539 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
HIST1H1AQ02539 AC079140.1-201ENST00000508039 487 ntBASIC11.95□□□□□ -0.5
HIST1H1AQ02539 GATB-205ENST00000508611 605 ntTSL 2 BASIC11.95□□□□□ -0.5
HIST1H1AQ02539 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC11.95□□□□□ -0.5
HIST1H1AQ02539 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC11.95□□□□□ -0.5
HIST1H1AQ02539 AP000842.3-202ENST00000569238 1080 ntBASIC11.95□□□□□ -0.5
HIST1H1AQ02539 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC11.95□□□□□ -0.5
HIST1H1AQ02539 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC11.95□□□□□ -0.5
HIST1H1AQ02539 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
HIST1H1AQ02539 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC11.95□□□□□ -0.5
HIST1H1AQ02539 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC11.95□□□□□ -0.5
HIST1H1AQ02539 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
HIST1H1AQ02539 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC11.95□□□□□ -0.5
HIST1H1AQ02539 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC11.95□□□□□ -0.5
HIST1H1AQ02539 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
HIST1H1AQ02539 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
HIST1H1AQ02539 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC11.95□□□□□ -0.5
HIST1H1AQ02539 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
HIST1H1AQ02539 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
HIST1H1AQ02539 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
HIST1H1AQ02539 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
HIST1H1AQ02539 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
HIST1H1AQ02539 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC11.95□□□□□ -0.5
HIST1H1AQ02539 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
HIST1H1AQ02539 FOXO1B-201ENST00000504678 1527 ntBASIC11.95□□□□□ -0.5
HIST1H1AQ02539 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC11.95□□□□□ -0.5
HIST1H1AQ02539 NRXN1-207ENST00000404971 7578 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
HIST1H1AQ02539 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
HIST1H1AQ02539 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC11.95□□□□□ -0.5
HIST1H1AQ02539 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC11.95□□□□□ -0.5
HIST1H1AQ02539 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC11.95□□□□□ -0.5
HIST1H1AQ02539 SACM1L-201ENST00000389061 3723 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
HIST1H1AQ02539 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC11.95□□□□□ -0.5
HIST1H1AQ02539 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC11.95□□□□□ -0.5
HIST1H1AQ02539 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
HIST1H1AQ02539 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
HIST1H1AQ02539 REXO1L2P-201ENST00000425429 2069 ntBASIC11.95□□□□□ -0.5
HIST1H1AQ02539 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
HIST1H1AQ02539 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC11.94□□□□□ -0.5
HIST1H1AQ02539 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
HIST1H1AQ02539 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
HIST1H1AQ02539 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
HIST1H1AQ02539 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
HIST1H1AQ02539 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC11.94□□□□□ -0.5
HIST1H1AQ02539 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC11.94□□□□□ -0.5
HIST1H1AQ02539 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
HIST1H1AQ02539 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
HIST1H1AQ02539 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC11.94□□□□□ -0.5
HIST1H1AQ02539 AC090616.6-203ENST00000579186 1945 ntBASIC11.94□□□□□ -0.5
HIST1H1AQ02539 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
HIST1H1AQ02539 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
HIST1H1AQ02539 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
HIST1H1AQ02539 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC11.94□□□□□ -0.5
HIST1H1AQ02539 AC018892.3-201ENST00000623986 2499 ntBASIC11.94□□□□□ -0.5
HIST1H1AQ02539 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
HIST1H1AQ02539 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC11.94□□□□□ -0.5
HIST1H1AQ02539 SMARCA2-204ENST00000357248 5855 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
HIST1H1AQ02539 BNIP3P1-202ENST00000550043 1585 ntBASIC11.94□□□□□ -0.5
HIST1H1AQ02539 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC11.94□□□□□ -0.5
HIST1H1AQ02539 CEMIP-201ENST00000220244 7226 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
HIST1H1AQ02539 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
HIST1H1AQ02539 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
HIST1H1AQ02539 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
HIST1H1AQ02539 MCCD1P2-201ENST00000423228 335 ntBASIC11.94□□□□□ -0.5
HIST1H1AQ02539 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC11.94□□□□□ -0.5
HIST1H1AQ02539 ACTG1P14-201ENST00000446382 1122 ntBASIC11.94□□□□□ -0.5
HIST1H1AQ02539 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC11.94□□□□□ -0.5
HIST1H1AQ02539 KRT8P48-201ENST00000515599 1220 ntBASIC11.94□□□□□ -0.5
HIST1H1AQ02539 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC11.94□□□□□ -0.5
HIST1H1AQ02539 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC11.94□□□□□ -0.5
HIST1H1AQ02539 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC11.94□□□□□ -0.5
HIST1H1AQ02539 AC243562.1-201ENST00000560672 389 ntBASIC11.94□□□□□ -0.5
HIST1H1AQ02539 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
HIST1H1AQ02539 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC11.94□□□□□ -0.5
HIST1H1AQ02539 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC11.94□□□□□ -0.5
HIST1H1AQ02539 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC11.94□□□□□ -0.5
HIST1H1AQ02539 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC11.94□□□□□ -0.5
HIST1H1AQ02539 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC11.94□□□□□ -0.5
HIST1H1AQ02539 MYLK-203ENST00000359169 7585 ntAPPRIS P3 TSL 5 BASIC11.94□□□□□ -0.5
HIST1H1AQ02539 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC11.94□□□□□ -0.5
HIST1H1AQ02539 AC107918.4-201ENST00000641966 3141 ntBASIC11.94□□□□□ -0.5
HIST1H1AQ02539 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
HIST1H1AQ02539 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
HIST1H1AQ02539 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
HIST1H1AQ02539 MYLK-208ENST00000475616 5745 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
HIST1H1AQ02539 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms