Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC17.45■□□□□ 0.38
CCNA1P78396 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
CCNA1P78396 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC17.45■□□□□ 0.38
CCNA1P78396 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCNA1P78396 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCNA1P78396 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCNA1P78396 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CCNA1P78396 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC17.44■□□□□ 0.38
CCNA1P78396 KRT8P19-201ENST00000551916 1455 ntBASIC17.44■□□□□ 0.38
CCNA1P78396 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC17.44■□□□□ 0.38
CCNA1P78396 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCNA1P78396 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCNA1P78396 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC17.44■□□□□ 0.38
CCNA1P78396 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CCNA1P78396 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCNA1P78396 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CCNA1P78396 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CCNA1P78396 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CCNA1P78396 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCNA1P78396 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CCNA1P78396 TSACC-208ENST00000481479 741 ntTSL 2 BASIC17.44■□□□□ 0.38
CCNA1P78396 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC17.44■□□□□ 0.38
CCNA1P78396 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
CCNA1P78396 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCNA1P78396 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC17.44■□□□□ 0.38
CCNA1P78396 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC17.44■□□□□ 0.38
CCNA1P78396 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC17.44■□□□□ 0.38
CCNA1P78396 AP001505.2-201ENST00000616815 443 ntBASIC17.44■□□□□ 0.38
CCNA1P78396 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
CCNA1P78396 AC127383.1-201ENST00000444697 1800 ntBASIC17.44■□□□□ 0.38
CCNA1P78396 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CCNA1P78396 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCNA1P78396 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCNA1P78396 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC17.44■□□□□ 0.38
CCNA1P78396 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC17.44■□□□□ 0.38
CCNA1P78396 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
CCNA1P78396 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCNA1P78396 AC055811.4-201ENST00000624039 1754 ntBASIC17.43■□□□□ 0.38
CCNA1P78396 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC17.43■□□□□ 0.38
CCNA1P78396 KRT8P29-201ENST00000420409 1371 ntBASIC17.43■□□□□ 0.38
CCNA1P78396 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CCNA1P78396 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCNA1P78396 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCNA1P78396 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC17.43■□□□□ 0.38
CCNA1P78396 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC17.43■□□□□ 0.38
CCNA1P78396 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC17.43■□□□□ 0.38
CCNA1P78396 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCNA1P78396 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCNA1P78396 SLC25A26-201ENST00000336733 1023 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CCNA1P78396 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCNA1P78396 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CCNA1P78396 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC17.43■□□□□ 0.38
CCNA1P78396 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
CCNA1P78396 Z97180.1-201ENST00000445173 988 ntBASIC17.43■□□□□ 0.38
CCNA1P78396 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC17.43■□□□□ 0.38
CCNA1P78396 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCNA1P78396 AC100850.1-201ENST00000506768 649 ntBASIC17.43■□□□□ 0.38
CCNA1P78396 CHMP4BP1-201ENST00000556017 588 ntBASIC17.43■□□□□ 0.38
CCNA1P78396 AC005730.2-201ENST00000564549 1184 ntBASIC17.43■□□□□ 0.38
CCNA1P78396 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC17.43■□□□□ 0.38
CCNA1P78396 AC091544.8-201ENST00000619490 361 ntBASIC17.43■□□□□ 0.38
CCNA1P78396 AC138466.3-201ENST00000619983 221 ntBASIC17.43■□□□□ 0.38
CCNA1P78396 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
CCNA1P78396 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC17.43■□□□□ 0.38
CCNA1P78396 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCNA1P78396 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CCNA1P78396 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC17.43■□□□□ 0.38
CCNA1P78396 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCNA1P78396 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCNA1P78396 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCNA1P78396 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
CCNA1P78396 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCNA1P78396 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC17.42■□□□□ 0.38
CCNA1P78396 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCNA1P78396 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCNA1P78396 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC17.42■□□□□ 0.38
CCNA1P78396 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC17.42■□□□□ 0.38
CCNA1P78396 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC17.42■□□□□ 0.38
CCNA1P78396 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CCNA1P78396 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCNA1P78396 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCNA1P78396 AC012506.3-201ENST00000415245 892 ntTSL 3 BASIC17.42■□□□□ 0.38
CCNA1P78396 AC011742.3-201ENST00000439053 820 ntBASIC17.42■□□□□ 0.38
CCNA1P78396 SPTLC1P5-201ENST00000450718 252 ntBASIC17.42■□□□□ 0.38
CCNA1P78396 BX324167.1-201ENST00000451118 805 ntTSL 5 BASIC17.42■□□□□ 0.38
CCNA1P78396 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCNA1P78396 RN7SL720P-201ENST00000488178 304 ntBASIC17.42■□□□□ 0.38
CCNA1P78396 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC17.42■□□□□ 0.38
CCNA1P78396 AC106794.1-201ENST00000506935 792 ntBASIC17.42■□□□□ 0.38
CCNA1P78396 AP003171.2-201ENST00000528208 925 ntBASIC17.42■□□□□ 0.38
CCNA1P78396 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCNA1P78396 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC17.42■□□□□ 0.38
CCNA1P78396 AC068152.1-201ENST00000575930 685 ntTSL 5 BASIC17.42■□□□□ 0.38
CCNA1P78396 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC17.42■□□□□ 0.38
CCNA1P78396 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC17.42■□□□□ 0.38
CCNA1P78396 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC17.42■□□□□ 0.38
CCNA1P78396 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
CCNA1P78396 AC100757.4-201ENST00000626934 759 ntBASIC17.42■□□□□ 0.38
CCNA1P78396 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC17.42■□□□□ 0.38
CCNA1P78396 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC17.42■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 56 ms