Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC18.07■□□□□ 0.48
RHBDL3P58872 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC18.07■□□□□ 0.48
RHBDL3P58872 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RHBDL3P58872 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RHBDL3P58872 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC18.07■□□□□ 0.48
RHBDL3P58872 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC18.07■□□□□ 0.48
RHBDL3P58872 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
RHBDL3P58872 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RHBDL3P58872 POM121L10P-201ENST00000436994 1285 ntBASIC18.07■□□□□ 0.48
RHBDL3P58872 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC18.07■□□□□ 0.48
RHBDL3P58872 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC18.07■□□□□ 0.48
RHBDL3P58872 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC18.07■□□□□ 0.48
RHBDL3P58872 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC18.07■□□□□ 0.48
RHBDL3P58872 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
RHBDL3P58872 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC18.07■□□□□ 0.48
RHBDL3P58872 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RHBDL3P58872 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RHBDL3P58872 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
RHBDL3P58872 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RHBDL3P58872 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
RHBDL3P58872 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RHBDL3P58872 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
RHBDL3P58872 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
RHBDL3P58872 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC18.07■□□□□ 0.48
RHBDL3P58872 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
RHBDL3P58872 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
RHBDL3P58872 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
RHBDL3P58872 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
RHBDL3P58872 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC18.06■□□□□ 0.48
RHBDL3P58872 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RHBDL3P58872 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RHBDL3P58872 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC18.06■□□□□ 0.48
RHBDL3P58872 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
RHBDL3P58872 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC18.06■□□□□ 0.48
RHBDL3P58872 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
RHBDL3P58872 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC18.06■□□□□ 0.48
RHBDL3P58872 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RHBDL3P58872 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC18.06■□□□□ 0.48
RHBDL3P58872 AC100850.1-201ENST00000506768 649 ntBASIC18.06■□□□□ 0.48
RHBDL3P58872 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
RHBDL3P58872 AP001002.3-201ENST00000623482 206 ntBASIC18.06■□□□□ 0.48
RHBDL3P58872 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
RHBDL3P58872 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RHBDL3P58872 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC18.06■□□□□ 0.48
RHBDL3P58872 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
RHBDL3P58872 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
RHBDL3P58872 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
RHBDL3P58872 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC18.06■□□□□ 0.48
RHBDL3P58872 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RHBDL3P58872 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC18.06■□□□□ 0.48
RHBDL3P58872 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC18.06■□□□□ 0.48
RHBDL3P58872 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
RHBDL3P58872 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RHBDL3P58872 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
RHBDL3P58872 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RHBDL3P58872 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
RHBDL3P58872 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC18.06■□□□□ 0.48
RHBDL3P58872 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
RHBDL3P58872 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RHBDL3P58872 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC18.05■□□□□ 0.48
RHBDL3P58872 AC008894.3-201ENST00000624324 3103 ntBASIC18.05■□□□□ 0.48
RHBDL3P58872 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC18.05■□□□□ 0.48
RHBDL3P58872 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
RHBDL3P58872 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RHBDL3P58872 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RHBDL3P58872 AC112693.3-201ENST00000624819 1983 ntBASIC18.05■□□□□ 0.48
RHBDL3P58872 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
RHBDL3P58872 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RHBDL3P58872 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
RHBDL3P58872 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RHBDL3P58872 SMS-201ENST00000379404 1174 ntTSL 3 BASIC18.05■□□□□ 0.48
RHBDL3P58872 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
RHBDL3P58872 AL136309.1-201ENST00000403917 691 ntBASIC18.05■□□□□ 0.48
RHBDL3P58872 CALR4P-201ENST00000431943 946 ntBASIC18.05■□□□□ 0.48
RHBDL3P58872 BX284668.4-201ENST00000453917 508 ntBASIC18.05■□□□□ 0.48
RHBDL3P58872 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
RHBDL3P58872 AC091804.1-201ENST00000486888 567 ntBASIC18.05■□□□□ 0.48
RHBDL3P58872 TPI1-206ENST00000488464 791 ntTSL 5 BASIC18.05■□□□□ 0.48
RHBDL3P58872 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC18.05■□□□□ 0.48
RHBDL3P58872 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
RHBDL3P58872 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC18.05■□□□□ 0.48
RHBDL3P58872 KLK11-210ENST00000600362 759 ntTSL 3 BASIC18.05■□□□□ 0.48
RHBDL3P58872 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC18.05■□□□□ 0.48
RHBDL3P58872 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC18.05■□□□□ 0.48
RHBDL3P58872 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC18.05■□□□□ 0.48
RHBDL3P58872 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RHBDL3P58872 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
RHBDL3P58872 PES1-204ENST00000402284 2144 ntTSL 5 BASIC18.05■□□□□ 0.48
RHBDL3P58872 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RHBDL3P58872 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC18.05■□□□□ 0.48
RHBDL3P58872 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
RHBDL3P58872 AP000593.2-201ENST00000542775 1433 ntBASIC18.05■□□□□ 0.48
RHBDL3P58872 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RHBDL3P58872 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RHBDL3P58872 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC18.05■□□□□ 0.48
RHBDL3P58872 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RHBDL3P58872 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RHBDL3P58872 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC18.04■□□□□ 0.48
RHBDL3P58872 ACE-204ENST00000428043 5120 ntTSL 2 BASIC18.04■□□□□ 0.48
RHBDL3P58872 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms