Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
GTF2A1P52655 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
GTF2A1P52655 GPR89P-201ENST00000407924 1495 ntBASIC15.26■□□□□ 0.03
GTF2A1P52655 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
GTF2A1P52655 MEP1A-201ENST00000230588 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
GTF2A1P52655 FRMD1-205ENST00000440994 2857 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
GTF2A1P52655 FAM214B-204ENST00000378566 2566 ntTSL 2 BASIC15.26■□□□□ 0.03
GTF2A1P52655 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
GTF2A1P52655 ALDH3A2-201ENST00000176643 3928 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
GTF2A1P52655 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
GTF2A1P52655 NPAS4-201ENST00000311034 3303 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
GTF2A1P52655 HPS3-201ENST00000296051 4665 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
GTF2A1P52655 LGALS9-201ENST00000302228 3018 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
GTF2A1P52655 NLGN3-201ENST00000358741 3046 ntAPPRIS P4 TSL 5 BASIC15.25■□□□□ 0.03
GTF2A1P52655 DAB2IP-202ENST00000309989 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
GTF2A1P52655 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
GTF2A1P52655 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
GTF2A1P52655 AC021752.1-202ENST00000613161 2398 ntTSL 2 BASIC15.25■□□□□ 0.03
GTF2A1P52655 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
GTF2A1P52655 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
GTF2A1P52655 METTL13-203ENST00000367737 2865 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
GTF2A1P52655 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
GTF2A1P52655 CIITA-213ENST00000618327 4657 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
GTF2A1P52655 CLCNKB-202ENST00000375679 2567 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
GTF2A1P52655 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
GTF2A1P52655 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
GTF2A1P52655 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
GTF2A1P52655 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
GTF2A1P52655 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC15.25■□□□□ 0.03
GTF2A1P52655 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
GTF2A1P52655 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC15.25■□□□□ 0.03
GTF2A1P52655 ZNF444P1-201ENST00000559497 298 ntBASIC15.25■□□□□ 0.03
GTF2A1P52655 NAA38-203ENST00000575071 553 ntTSL 2 BASIC15.25■□□□□ 0.03
GTF2A1P52655 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC15.25■□□□□ 0.03
GTF2A1P52655 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC15.25■□□□□ 0.03
GTF2A1P52655 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC15.25■□□□□ 0.03
GTF2A1P52655 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC15.25■□□□□ 0.03
GTF2A1P52655 GPR32P1-201ENST00000601788 811 ntBASIC15.25■□□□□ 0.03
GTF2A1P52655 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
GTF2A1P52655 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC15.25■□□□□ 0.03
GTF2A1P52655 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC15.25■□□□□ 0.03
GTF2A1P52655 CDIP1-201ENST00000399599 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
GTF2A1P52655 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
GTF2A1P52655 PHF13-201ENST00000377648 3681 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
GTF2A1P52655 COL20A1-203ENST00000422202 8097 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
GTF2A1P52655 LINC01725-203ENST00000417975 3177 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
GTF2A1P52655 REV3L-207ENST00000435970 10943 ntTSL 2 BASIC15.25■□□□□ 0.03
GTF2A1P52655 GALC-201ENST00000261304 3883 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
GTF2A1P52655 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
GTF2A1P52655 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC15.25■□□□□ 0.03
GTF2A1P52655 AC113367.3-201ENST00000508316 1912 ntBASIC15.25■□□□□ 0.03
GTF2A1P52655 AMOTL2-202ENST00000422605 4335 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
GTF2A1P52655 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
GTF2A1P52655 GDAP1L1-208ENST00000617075 2645 ntTSL 5 BASIC15.25■□□□□ 0.03
GTF2A1P52655 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
GTF2A1P52655 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
GTF2A1P52655 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
GTF2A1P52655 AHCY-205ENST00000538132 2366 ntTSL 2 BASIC15.25■□□□□ 0.03
GTF2A1P52655 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
GTF2A1P52655 AC073548.1-201ENST00000624088 1882 ntBASIC15.25■□□□□ 0.03
GTF2A1P52655 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
GTF2A1P52655 CRTC1-202ENST00000338797 6929 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
GTF2A1P52655 AC021218.1-201ENST00000377722 2536 ntTSL 2 BASIC15.24■□□□□ 0.03
GTF2A1P52655 AC011298.1-201ENST00000407635 3398 ntTSL 2 BASIC15.24■□□□□ 0.03
GTF2A1P52655 BTNL8-201ENST00000231229 2229 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
GTF2A1P52655 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC15.24■□□□□ 0.03
GTF2A1P52655 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
GTF2A1P52655 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
GTF2A1P52655 KRT18P22-201ENST00000402024 1347 ntBASIC15.24■□□□□ 0.03
GTF2A1P52655 C10orf105-202ENST00000441508 4836 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
GTF2A1P52655 SON-203ENST00000381679 7860 ntTSL 5 BASIC15.24■□□□□ 0.03
GTF2A1P52655 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
GTF2A1P52655 UACA-201ENST00000322954 6939 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
GTF2A1P52655 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
GTF2A1P52655 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
GTF2A1P52655 PRPF4-201ENST00000374198 2787 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
GTF2A1P52655 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
GTF2A1P52655 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
GTF2A1P52655 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
GTF2A1P52655 FAM8A6P-201ENST00000407496 1135 ntBASIC15.24■□□□□ 0.03
GTF2A1P52655 SAPCD2P2-201ENST00000431719 1174 ntBASIC15.24■□□□□ 0.03
GTF2A1P52655 AC007967.3-201ENST00000434308 558 ntBASIC15.24■□□□□ 0.03
GTF2A1P52655 SLC25A3P1-201ENST00000443844 931 ntBASIC15.24■□□□□ 0.03
GTF2A1P52655 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC15.24■□□□□ 0.03
GTF2A1P52655 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC15.24■□□□□ 0.03
GTF2A1P52655 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC15.24■□□□□ 0.03
GTF2A1P52655 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC15.24■□□□□ 0.03
GTF2A1P52655 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC15.24■□□□□ 0.03
GTF2A1P52655 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC15.24■□□□□ 0.03
GTF2A1P52655 FAM9C-205ENST00000542843 5858 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
GTF2A1P52655 TP73-209ENST00000603362 1668 ntTSL 5 BASIC15.24■□□□□ 0.03
GTF2A1P52655 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC15.24■□□□□ 0.03
GTF2A1P52655 TBC1D26-201ENST00000437605 1868 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
GTF2A1P52655 AL031714.1-202ENST00000568106 3107 ntTSL 5 BASIC15.24■□□□□ 0.03
GTF2A1P52655 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC15.24■□□□□ 0.03
GTF2A1P52655 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
GTF2A1P52655 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC15.24■□□□□ 0.03
GTF2A1P52655 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
GTF2A1P52655 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
GTF2A1P52655 TMEM25-201ENST00000313236 2409 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 72.9 ms