Protein–RNA interactions for Protein: P51793

CLCN4, H(+)/Cl(-) exchange transporter 4, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4P51793 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
CLCN4P51793 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC16.18■□□□□ 0.18
CLCN4P51793 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC16.18■□□□□ 0.18
CLCN4P51793 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
CLCN4P51793 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CLCN4P51793 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CLCN4P51793 AC024909.3-201ENST00000611513 2257 ntBASIC16.17■□□□□ 0.18
CLCN4P51793 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CLCN4P51793 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CLCN4P51793 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CLCN4P51793 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CLCN4P51793 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CLCN4P51793 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CLCN4P51793 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC16.17■□□□□ 0.18
CLCN4P51793 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC16.17■□□□□ 0.18
CLCN4P51793 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC16.17■□□□□ 0.18
CLCN4P51793 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CLCN4P51793 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC16.17■□□□□ 0.18
CLCN4P51793 TISP43-201ENST00000409793 538 ntTSL 4 BASIC16.17■□□□□ 0.18
CLCN4P51793 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC16.17■□□□□ 0.18
CLCN4P51793 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CLCN4P51793 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC16.17■□□□□ 0.18
CLCN4P51793 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC16.17■□□□□ 0.18
CLCN4P51793 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC16.17■□□□□ 0.18
CLCN4P51793 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CLCN4P51793 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC16.17■□□□□ 0.18
CLCN4P51793 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC16.17■□□□□ 0.18
CLCN4P51793 NKG7-204ENST00000595217 816 ntTSL 2 BASIC16.17■□□□□ 0.18
CLCN4P51793 AL451050.2-201ENST00000606967 682 ntBASIC16.17■□□□□ 0.18
CLCN4P51793 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC16.17■□□□□ 0.18
CLCN4P51793 AC244157.2-201ENST00000616239 1006 ntBASIC16.17■□□□□ 0.18
CLCN4P51793 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CLCN4P51793 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CLCN4P51793 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC16.17■□□□□ 0.18
CLCN4P51793 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CLCN4P51793 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
CLCN4P51793 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CLCN4P51793 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CLCN4P51793 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
CLCN4P51793 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CLCN4P51793 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CLCN4P51793 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CLCN4P51793 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC16.16■□□□□ 0.18
CLCN4P51793 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
CLCN4P51793 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
CLCN4P51793 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC16.16■□□□□ 0.18
CLCN4P51793 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CLCN4P51793 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
CLCN4P51793 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC16.16■□□□□ 0.18
CLCN4P51793 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC16.16■□□□□ 0.18
CLCN4P51793 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
CLCN4P51793 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC16.16■□□□□ 0.18
CLCN4P51793 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
CLCN4P51793 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CLCN4P51793 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC16.16■□□□□ 0.18
CLCN4P51793 LSM5-207ENST00000410044 687 ntTSL 3 BASIC16.16■□□□□ 0.18
CLCN4P51793 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC16.16■□□□□ 0.18
CLCN4P51793 COX5BP1-201ENST00000507622 393 ntBASIC16.16■□□□□ 0.18
CLCN4P51793 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC16.16■□□□□ 0.18
CLCN4P51793 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC16.16■□□□□ 0.18
CLCN4P51793 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC16.16■□□□□ 0.18
CLCN4P51793 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC16.16■□□□□ 0.18
CLCN4P51793 RETN-203ENST00000629642 400 ntTSL 5 BASIC16.16■□□□□ 0.18
CLCN4P51793 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
CLCN4P51793 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC16.16■□□□□ 0.18
CLCN4P51793 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CLCN4P51793 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC16.16■□□□□ 0.18
CLCN4P51793 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
CLCN4P51793 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CLCN4P51793 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CLCN4P51793 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC16.16■□□□□ 0.18
CLCN4P51793 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CLCN4P51793 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CLCN4P51793 ANKRD30BP2-201ENST00000435744 1610 ntBASIC16.16■□□□□ 0.18
CLCN4P51793 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC16.16■□□□□ 0.18
CLCN4P51793 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC16.16■□□□□ 0.18
CLCN4P51793 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC16.16■□□□□ 0.18
CLCN4P51793 TKT-202ENST00000423516 2075 ntTSL 2 BASIC16.15■□□□□ 0.18
CLCN4P51793 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CLCN4P51793 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC16.15■□□□□ 0.18
CLCN4P51793 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC16.15■□□□□ 0.18
CLCN4P51793 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CLCN4P51793 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC16.15■□□□□ 0.18
CLCN4P51793 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
CLCN4P51793 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CLCN4P51793 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC16.15■□□□□ 0.18
CLCN4P51793 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CLCN4P51793 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CLCN4P51793 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CLCN4P51793 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC16.15■□□□□ 0.18
CLCN4P51793 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CLCN4P51793 AL662890.1-201ENST00000396818 632 ntBASIC16.15■□□□□ 0.18
CLCN4P51793 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CLCN4P51793 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC16.15■□□□□ 0.18
CLCN4P51793 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC16.15■□□□□ 0.18
CLCN4P51793 EIF3FP3-201ENST00000434851 1086 ntBASIC16.15■□□□□ 0.18
CLCN4P51793 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC16.15■□□□□ 0.18
CLCN4P51793 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC16.15■□□□□ 0.18
CLCN4P51793 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC16.15■□□□□ 0.18
CLCN4P51793 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC16.15■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms