Protein–RNA interactions for Protein: P51654

GPC3, Glypican-3, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3P51654 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
GPC3P51654 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
GPC3P51654 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
GPC3P51654 MST1L-201ENST00000442552 2185 ntBASIC17.05■□□□□ 0.32
GPC3P51654 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
GPC3P51654 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
GPC3P51654 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
GPC3P51654 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC17.05■□□□□ 0.32
GPC3P51654 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC17.05■□□□□ 0.32
GPC3P51654 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
GPC3P51654 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
GPC3P51654 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC17.04■□□□□ 0.32
GPC3P51654 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
GPC3P51654 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC17.04■□□□□ 0.32
GPC3P51654 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
GPC3P51654 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC17.04■□□□□ 0.32
GPC3P51654 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
GPC3P51654 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
GPC3P51654 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
GPC3P51654 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
GPC3P51654 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
GPC3P51654 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC17.04■□□□□ 0.32
GPC3P51654 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
GPC3P51654 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC17.04■□□□□ 0.32
GPC3P51654 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
GPC3P51654 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
GPC3P51654 MPV17-208ENST00000405076 603 ntTSL 5 BASIC17.04■□□□□ 0.32
GPC3P51654 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC17.04■□□□□ 0.32
GPC3P51654 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC17.04■□□□□ 0.32
GPC3P51654 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
GPC3P51654 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC17.04■□□□□ 0.32
GPC3P51654 RPL7P3-201ENST00000441388 714 ntBASIC17.04■□□□□ 0.32
GPC3P51654 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC17.04■□□□□ 0.32
GPC3P51654 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC17.04■□□□□ 0.32
GPC3P51654 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC17.04■□□□□ 0.32
GPC3P51654 MFF-223ENST00000524634 647 ntTSL 2 BASIC17.04■□□□□ 0.32
GPC3P51654 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC17.04■□□□□ 0.32
GPC3P51654 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC17.04■□□□□ 0.32
GPC3P51654 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC17.04■□□□□ 0.32
GPC3P51654 AL033527.4-201ENST00000641026 673 ntBASIC17.04■□□□□ 0.32
GPC3P51654 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC17.04■□□□□ 0.32
GPC3P51654 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
GPC3P51654 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
GPC3P51654 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC17.04■□□□□ 0.32
GPC3P51654 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
GPC3P51654 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
GPC3P51654 ING5-213ENST00000636051 4199 ntTSL 5 BASIC17.04■□□□□ 0.32
GPC3P51654 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC17.04■□□□□ 0.32
GPC3P51654 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
GPC3P51654 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
GPC3P51654 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
GPC3P51654 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC17.04■□□□□ 0.32
GPC3P51654 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC17.04■□□□□ 0.32
GPC3P51654 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
GPC3P51654 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC17.04■□□□□ 0.32
GPC3P51654 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
GPC3P51654 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
GPC3P51654 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
GPC3P51654 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
GPC3P51654 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
GPC3P51654 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC17.03■□□□□ 0.32
GPC3P51654 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC17.03■□□□□ 0.32
GPC3P51654 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
GPC3P51654 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
GPC3P51654 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC17.03■□□□□ 0.32
GPC3P51654 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
GPC3P51654 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
GPC3P51654 STX1A-203ENST00000395155 783 ntTSL 2 BASIC17.03■□□□□ 0.32
GPC3P51654 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC17.03■□□□□ 0.32
GPC3P51654 HLA-V-201ENST00000429037 534 ntBASIC17.03■□□□□ 0.32
GPC3P51654 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
GPC3P51654 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC17.03■□□□□ 0.32
GPC3P51654 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC17.03■□□□□ 0.32
GPC3P51654 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC17.03■□□□□ 0.32
GPC3P51654 AP000812.2-201ENST00000538934 718 ntBASIC17.03■□□□□ 0.32
GPC3P51654 AC244669.2-201ENST00000612320 853 ntBASIC17.03■□□□□ 0.32
GPC3P51654 AP005019.2-201ENST00000615104 511 ntBASIC17.03■□□□□ 0.32
GPC3P51654 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
GPC3P51654 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
GPC3P51654 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC17.03■□□□□ 0.32
GPC3P51654 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
GPC3P51654 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
GPC3P51654 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
GPC3P51654 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
GPC3P51654 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
GPC3P51654 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
GPC3P51654 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
GPC3P51654 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC17.03■□□□□ 0.32
GPC3P51654 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
GPC3P51654 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
GPC3P51654 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
GPC3P51654 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
GPC3P51654 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
GPC3P51654 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
GPC3P51654 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
GPC3P51654 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
GPC3P51654 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC17.03■□□□□ 0.32
GPC3P51654 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
GPC3P51654 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
GPC3P51654 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms