Protein–RNA interactions for Protein: P51160

PDE6C, Cone cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha', humanhuman

Predictions only

Length 858 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6CP51160 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC16.78■□□□□ 0.28
PDE6CP51160 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PDE6CP51160 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PDE6CP51160 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC16.78■□□□□ 0.28
PDE6CP51160 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PDE6CP51160 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PDE6CP51160 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
PDE6CP51160 GRAP-202ENST00000395635 834 ntTSL 2 BASIC16.78■□□□□ 0.28
PDE6CP51160 GAPDHP21-201ENST00000450301 1010 ntBASIC16.78■□□□□ 0.28
PDE6CP51160 TMPRSS11CP-201ENST00000453277 683 ntBASIC16.78■□□□□ 0.28
PDE6CP51160 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PDE6CP51160 SLED1-202ENST00000512051 380 ntBASIC16.78■□□□□ 0.28
PDE6CP51160 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC16.78■□□□□ 0.28
PDE6CP51160 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
PDE6CP51160 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC16.78■□□□□ 0.28
PDE6CP51160 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PDE6CP51160 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC16.78■□□□□ 0.28
PDE6CP51160 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
PDE6CP51160 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC16.78■□□□□ 0.28
PDE6CP51160 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PDE6CP51160 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
PDE6CP51160 AC007541.1-201ENST00000570282 1469 ntBASIC16.78■□□□□ 0.28
PDE6CP51160 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PDE6CP51160 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC16.78■□□□□ 0.28
PDE6CP51160 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PDE6CP51160 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC16.78■□□□□ 0.28
PDE6CP51160 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC16.77■□□□□ 0.28
PDE6CP51160 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC16.77■□□□□ 0.28
PDE6CP51160 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
PDE6CP51160 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
PDE6CP51160 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PDE6CP51160 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PDE6CP51160 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
PDE6CP51160 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
PDE6CP51160 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
PDE6CP51160 AC126365.1-201ENST00000578585 1514 ntBASIC16.77■□□□□ 0.28
PDE6CP51160 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
PDE6CP51160 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
PDE6CP51160 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC16.77■□□□□ 0.28
PDE6CP51160 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
PDE6CP51160 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC16.77■□□□□ 0.28
PDE6CP51160 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC16.77■□□□□ 0.28
PDE6CP51160 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC16.77■□□□□ 0.28
PDE6CP51160 DOC2GP-202ENST00000514950 1163 ntBASIC16.77■□□□□ 0.28
PDE6CP51160 CFL1-212ENST00000531413 636 ntTSL 3 BASIC16.77■□□□□ 0.28
PDE6CP51160 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
PDE6CP51160 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC16.77■□□□□ 0.28
PDE6CP51160 AC044860.1-202ENST00000559481 777 ntBASIC16.77■□□□□ 0.28
PDE6CP51160 AC104794.3-201ENST00000566840 1248 ntBASIC16.77■□□□□ 0.28
PDE6CP51160 AC140912.1-201ENST00000577171 1054 ntBASIC16.77■□□□□ 0.28
PDE6CP51160 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC16.77■□□□□ 0.28
PDE6CP51160 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC16.77■□□□□ 0.28
PDE6CP51160 AC025048.3-201ENST00000590609 569 ntBASIC16.77■□□□□ 0.28
PDE6CP51160 TEX48-202ENST00000612244 662 ntTSL 3 BASIC16.77■□□□□ 0.28
PDE6CP51160 AC005702.4-201ENST00000618393 416 ntBASIC16.77■□□□□ 0.28
PDE6CP51160 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC16.77■□□□□ 0.28
PDE6CP51160 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC16.77■□□□□ 0.28
PDE6CP51160 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC16.77■□□□□ 0.28
PDE6CP51160 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
PDE6CP51160 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
PDE6CP51160 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
PDE6CP51160 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
PDE6CP51160 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC16.77■□□□□ 0.27
PDE6CP51160 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC16.77■□□□□ 0.27
PDE6CP51160 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
PDE6CP51160 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
PDE6CP51160 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.27
PDE6CP51160 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC16.77■□□□□ 0.27
PDE6CP51160 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
PDE6CP51160 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
PDE6CP51160 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC16.77■□□□□ 0.27
PDE6CP51160 KRT8P44-201ENST00000441609 1350 ntBASIC16.77■□□□□ 0.27
PDE6CP51160 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PDE6CP51160 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PDE6CP51160 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PDE6CP51160 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC16.76■□□□□ 0.27
PDE6CP51160 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
PDE6CP51160 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC16.76■□□□□ 0.27
PDE6CP51160 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC16.76■□□□□ 0.27
PDE6CP51160 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC16.76■□□□□ 0.27
PDE6CP51160 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC16.76■□□□□ 0.27
PDE6CP51160 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC16.76■□□□□ 0.27
PDE6CP51160 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PDE6CP51160 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
PDE6CP51160 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC16.76■□□□□ 0.27
PDE6CP51160 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
PDE6CP51160 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PDE6CP51160 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
PDE6CP51160 OSM-203ENST00000403463 464 ntTSL 3 BASIC16.76■□□□□ 0.27
PDE6CP51160 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC16.76■□□□□ 0.27
PDE6CP51160 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC16.76■□□□□ 0.27
PDE6CP51160 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC16.76■□□□□ 0.27
PDE6CP51160 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC16.76■□□□□ 0.27
PDE6CP51160 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
PDE6CP51160 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC16.76■□□□□ 0.27
PDE6CP51160 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC16.76■□□□□ 0.27
PDE6CP51160 Z97205.2-201ENST00000564697 1639 ntBASIC16.76■□□□□ 0.27
PDE6CP51160 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PDE6CP51160 C1R-202ENST00000536053 2347 ntTSL 2 BASIC16.76■□□□□ 0.27
PDE6CP51160 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms