Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC14.48□□□□□ -0.09
RNF144AP50876 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
RNF144AP50876 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
RNF144AP50876 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
RNF144AP50876 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
RNF144AP50876 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
RNF144AP50876 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
RNF144AP50876 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
RNF144AP50876 GRAMD4P3-201ENST00000621665 1669 ntBASIC14.48□□□□□ -0.09
RNF144AP50876 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
RNF144AP50876 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
RNF144AP50876 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
RNF144AP50876 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC14.48□□□□□ -0.09
RNF144AP50876 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
RNF144AP50876 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC14.48□□□□□ -0.09
RNF144AP50876 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC14.48□□□□□ -0.09
RNF144AP50876 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
RNF144AP50876 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
RNF144AP50876 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC14.47□□□□□ -0.09
RNF144AP50876 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
RNF144AP50876 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC14.47□□□□□ -0.09
RNF144AP50876 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
RNF144AP50876 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RNF144AP50876 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RNF144AP50876 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
RNF144AP50876 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
RNF144AP50876 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RNF144AP50876 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
RNF144AP50876 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
RNF144AP50876 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC14.47□□□□□ -0.09
RNF144AP50876 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
RNF144AP50876 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC14.47□□□□□ -0.09
RNF144AP50876 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC14.47□□□□□ -0.09
RNF144AP50876 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC14.47□□□□□ -0.09
RNF144AP50876 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC14.47□□□□□ -0.09
RNF144AP50876 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RNF144AP50876 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
RNF144AP50876 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC14.47□□□□□ -0.09
RNF144AP50876 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
RNF144AP50876 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC14.47□□□□□ -0.09
RNF144AP50876 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC14.47□□□□□ -0.09
RNF144AP50876 HLA-V-204ENST00000476601 1289 ntBASIC14.47□□□□□ -0.09
RNF144AP50876 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RNF144AP50876 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
RNF144AP50876 AC091489.1-201ENST00000563866 691 ntTSL 3 BASIC14.47□□□□□ -0.09
RNF144AP50876 MPI-209ENST00000564003 1195 ntTSL 2 BASIC14.47□□□□□ -0.09
RNF144AP50876 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC14.47□□□□□ -0.09
RNF144AP50876 AC025048.3-201ENST00000590609 569 ntBASIC14.47□□□□□ -0.09
RNF144AP50876 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC14.47□□□□□ -0.09
RNF144AP50876 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
RNF144AP50876 AC005702.4-201ENST00000618393 416 ntBASIC14.47□□□□□ -0.09
RNF144AP50876 MIR6069-201ENST00000620069 79 ntBASIC14.47□□□□□ -0.09
RNF144AP50876 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
RNF144AP50876 CICP11-201ENST00000434745 2827 ntBASIC14.47□□□□□ -0.09
RNF144AP50876 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RNF144AP50876 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RNF144AP50876 GSN-215ENST00000545652 2428 ntTSL 2 BASIC14.47□□□□□ -0.09
RNF144AP50876 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC14.47□□□□□ -0.09
RNF144AP50876 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC14.47□□□□□ -0.09
RNF144AP50876 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
RNF144AP50876 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC14.47□□□□□ -0.09
RNF144AP50876 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RNF144AP50876 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC14.47□□□□□ -0.09
RNF144AP50876 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
RNF144AP50876 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RNF144AP50876 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
RNF144AP50876 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
RNF144AP50876 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
RNF144AP50876 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RNF144AP50876 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
RNF144AP50876 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
RNF144AP50876 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
RNF144AP50876 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
RNF144AP50876 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
RNF144AP50876 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
RNF144AP50876 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
RNF144AP50876 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
RNF144AP50876 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
RNF144AP50876 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
RNF144AP50876 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
RNF144AP50876 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
RNF144AP50876 C1R-202ENST00000536053 2347 ntTSL 2 BASIC14.46□□□□□ -0.09
RNF144AP50876 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
RNF144AP50876 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
RNF144AP50876 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
RNF144AP50876 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC14.46□□□□□ -0.09
RNF144AP50876 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC14.46□□□□□ -0.09
RNF144AP50876 AL645939.2-201ENST00000427340 991 ntBASIC14.46□□□□□ -0.09
RNF144AP50876 SERBP1P3-201ENST00000459980 809 ntBASIC14.46□□□□□ -0.09
RNF144AP50876 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC14.46□□□□□ -0.09
RNF144AP50876 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC14.46□□□□□ -0.09
RNF144AP50876 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC14.46□□□□□ -0.09
RNF144AP50876 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC14.46□□□□□ -0.09
RNF144AP50876 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC14.46□□□□□ -0.09
RNF144AP50876 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC14.46□□□□□ -0.09
RNF144AP50876 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
RNF144AP50876 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC14.46□□□□□ -0.09
RNF144AP50876 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
RNF144AP50876 AL844908.2-201ENST00000609461 460 ntBASIC14.46□□□□□ -0.09
RNF144AP50876 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms