Protein–RNA interactions for Protein: P49450

CENPA, Histone H3-like centromeric protein A, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPAP49450 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC14.15□□□□□ -0.14
CENPAP49450 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CENPAP49450 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC14.15□□□□□ -0.14
CENPAP49450 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC14.15□□□□□ -0.14
CENPAP49450 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
CENPAP49450 AC005829.1-201ENST00000570002 483 ntBASIC14.15□□□□□ -0.14
CENPAP49450 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CENPAP49450 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC14.15□□□□□ -0.14
CENPAP49450 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC14.15□□□□□ -0.14
CENPAP49450 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC14.15□□□□□ -0.14
CENPAP49450 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
CENPAP49450 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC14.15□□□□□ -0.14
CENPAP49450 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
CENPAP49450 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
CENPAP49450 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
CENPAP49450 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC14.15□□□□□ -0.14
CENPAP49450 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
CENPAP49450 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CENPAP49450 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC14.15□□□□□ -0.14
CENPAP49450 HIPK1-205ENST00000369558 8157 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CENPAP49450 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CENPAP49450 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC14.15□□□□□ -0.14
CENPAP49450 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC14.15□□□□□ -0.14
CENPAP49450 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC14.15□□□□□ -0.14
CENPAP49450 KRT8P37-201ENST00000451609 1420 ntBASIC14.15□□□□□ -0.14
CENPAP49450 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC14.15□□□□□ -0.14
CENPAP49450 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC14.15□□□□□ -0.14
CENPAP49450 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CENPAP49450 ALX4-201ENST00000329255 5750 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
CENPAP49450 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CENPAP49450 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
CENPAP49450 GDPGP1-202ENST00000558017 5323 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
CENPAP49450 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CENPAP49450 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CENPAP49450 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC14.14□□□□□ -0.15
CENPAP49450 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
CENPAP49450 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
CENPAP49450 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CENPAP49450 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC14.14□□□□□ -0.15
CENPAP49450 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CENPAP49450 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CENPAP49450 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CENPAP49450 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CENPAP49450 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CENPAP49450 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
CENPAP49450 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
CENPAP49450 MKNK2P1-201ENST00000437526 628 ntBASIC14.14□□□□□ -0.15
CENPAP49450 PHKG1P2-201ENST00000457537 863 ntBASIC14.14□□□□□ -0.15
CENPAP49450 AC069335.1-201ENST00000489972 472 ntBASIC14.14□□□□□ -0.15
CENPAP49450 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC14.14□□□□□ -0.15
CENPAP49450 CCND1-203ENST00000536559 553 ntTSL 3 BASIC14.14□□□□□ -0.15
CENPAP49450 LINC01225-203ENST00000563550 1244 ntBASIC14.14□□□□□ -0.15
CENPAP49450 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC14.14□□□□□ -0.15
CENPAP49450 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC14.14□□□□□ -0.15
CENPAP49450 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
CENPAP49450 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
CENPAP49450 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CENPAP49450 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CENPAP49450 AGL-203ENST00000361915 7368 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CENPAP49450 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
CENPAP49450 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC14.14□□□□□ -0.15
CENPAP49450 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC14.14□□□□□ -0.15
CENPAP49450 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
CENPAP49450 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CENPAP49450 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
CENPAP49450 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CENPAP49450 FLNA-201ENST00000344736 7932 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
CENPAP49450 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
CENPAP49450 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CENPAP49450 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC14.14□□□□□ -0.15
CENPAP49450 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CENPAP49450 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CENPAP49450 MTUS1-204ENST00000381869 6256 ntTSL 5 BASIC14.14□□□□□ -0.15
CENPAP49450 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CENPAP49450 FLNC-201ENST00000325888 9188 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
CENPAP49450 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC14.14□□□□□ -0.15
CENPAP49450 SCARF1-201ENST00000263071 3443 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
CENPAP49450 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
CENPAP49450 CYP4F24P-201ENST00000586049 1580 ntBASIC14.13□□□□□ -0.15
CENPAP49450 CA12-201ENST00000178638 6413 ntAPPRIS P4 TSL 1 (best) BASIC14.13□□□□□ -0.15
CENPAP49450 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
CENPAP49450 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC14.13□□□□□ -0.15
CENPAP49450 GALNT4-201ENST00000529983 5399 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
CENPAP49450 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC14.13□□□□□ -0.15
CENPAP49450 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC14.13□□□□□ -0.15
CENPAP49450 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CENPAP49450 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CENPAP49450 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC14.13□□□□□ -0.15
CENPAP49450 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CENPAP49450 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
CENPAP49450 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
CENPAP49450 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CENPAP49450 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
CENPAP49450 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC14.13□□□□□ -0.15
CENPAP49450 TECPR1-204ENST00000447648 6564 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CENPAP49450 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC14.13□□□□□ -0.15
CENPAP49450 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC14.13□□□□□ -0.15
CENPAP49450 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CENPAP49450 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC14.13□□□□□ -0.15
CENPAP49450 KRT18P32-201ENST00000424695 1287 ntBASIC14.13□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 61.4 ms