Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC16.58■□□□□ 0.24
SSR1P43307 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
SSR1P43307 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
SSR1P43307 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
SSR1P43307 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC16.58■□□□□ 0.24
SSR1P43307 AL359183.1-201ENST00000623796 2132 ntBASIC16.58■□□□□ 0.24
SSR1P43307 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC16.58■□□□□ 0.24
SSR1P43307 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
SSR1P43307 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC16.58■□□□□ 0.24
SSR1P43307 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SSR1P43307 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SSR1P43307 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SSR1P43307 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
SSR1P43307 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SSR1P43307 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SSR1P43307 COLGALT1-201ENST00000252599 3704 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
SSR1P43307 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SSR1P43307 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC16.57■□□□□ 0.24
SSR1P43307 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SSR1P43307 CELP-203ENST00000624767 2414 ntTSL 5 BASIC16.57■□□□□ 0.24
SSR1P43307 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC16.57■□□□□ 0.24
SSR1P43307 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SSR1P43307 PLXNB2-207ENST00000449103 6383 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
SSR1P43307 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SSR1P43307 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
SSR1P43307 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SSR1P43307 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC16.57■□□□□ 0.24
SSR1P43307 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC16.57■□□□□ 0.24
SSR1P43307 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
SSR1P43307 AL607033.1-201ENST00000623900 1599 ntBASIC16.57■□□□□ 0.24
SSR1P43307 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
SSR1P43307 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SSR1P43307 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC16.57■□□□□ 0.24
SSR1P43307 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC16.57■□□□□ 0.24
SSR1P43307 GPS2P2-201ENST00000430745 888 ntBASIC16.57■□□□□ 0.24
SSR1P43307 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC16.57■□□□□ 0.24
SSR1P43307 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC16.57■□□□□ 0.24
SSR1P43307 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC16.57■□□□□ 0.24
SSR1P43307 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC16.57■□□□□ 0.24
SSR1P43307 HNRNPUP1-201ENST00000554987 333 ntBASIC16.57■□□□□ 0.24
SSR1P43307 LITAF-210ENST00000571976 548 ntTSL 2 BASIC16.57■□□□□ 0.24
SSR1P43307 LITAF-214ENST00000574703 486 ntTSL 2 BASIC16.57■□□□□ 0.24
SSR1P43307 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC16.57■□□□□ 0.24
SSR1P43307 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SSR1P43307 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
SSR1P43307 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
SSR1P43307 RN7SL828P-201ENST00000607615 303 ntBASIC16.57■□□□□ 0.24
SSR1P43307 HADH-212ENST00000638621 741 ntTSL 5 BASIC16.57■□□□□ 0.24
SSR1P43307 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SSR1P43307 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC16.57■□□□□ 0.24
SSR1P43307 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC16.57■□□□□ 0.24
SSR1P43307 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
SSR1P43307 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC16.57■□□□□ 0.24
SSR1P43307 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
SSR1P43307 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
SSR1P43307 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SSR1P43307 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
SSR1P43307 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SSR1P43307 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SSR1P43307 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC16.56■□□□□ 0.24
SSR1P43307 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SSR1P43307 AL023775.1-201ENST00000454907 1746 ntBASIC16.56■□□□□ 0.24
SSR1P43307 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC16.56■□□□□ 0.24
SSR1P43307 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC16.56■□□□□ 0.24
SSR1P43307 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC16.56■□□□□ 0.24
SSR1P43307 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SSR1P43307 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
SSR1P43307 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SSR1P43307 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
SSR1P43307 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC16.56■□□□□ 0.24
SSR1P43307 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC16.56■□□□□ 0.24
SSR1P43307 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC16.56■□□□□ 0.24
SSR1P43307 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
SSR1P43307 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC16.56■□□□□ 0.24
SSR1P43307 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
SSR1P43307 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SSR1P43307 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
SSR1P43307 RPP21-221ENST00000428040 594 ntTSL 2 BASIC16.56■□□□□ 0.24
SSR1P43307 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC16.56■□□□□ 0.24
SSR1P43307 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SSR1P43307 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
SSR1P43307 NME4-207ENST00000450036 985 ntTSL 3 BASIC16.56■□□□□ 0.24
SSR1P43307 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SSR1P43307 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC16.56■□□□□ 0.24
SSR1P43307 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SSR1P43307 BANF1P1-201ENST00000553684 263 ntBASIC16.56■□□□□ 0.24
SSR1P43307 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SSR1P43307 AC009093.7-201ENST00000623853 1223 ntBASIC16.56■□□□□ 0.24
SSR1P43307 RAB34-224ENST00000636513 888 ntTSL 5 BASIC16.56■□□□□ 0.24
SSR1P43307 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SSR1P43307 AC112693.3-201ENST00000624819 1983 ntBASIC16.56■□□□□ 0.24
SSR1P43307 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC16.56■□□□□ 0.24
SSR1P43307 AL009178.2-201ENST00000597278 2719 ntBASIC16.56■□□□□ 0.24
SSR1P43307 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
SSR1P43307 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SSR1P43307 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
SSR1P43307 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
SSR1P43307 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
SSR1P43307 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC16.56■□□□□ 0.24
SSR1P43307 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 92.3 ms