Protein–RNA interactions for Protein: P40198

CEACAM3, Carcinoembryonic antigen-related cell adhesion molecule 3, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3P40198 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
CEACAM3P40198 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CEACAM3P40198 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CEACAM3P40198 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CEACAM3P40198 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CEACAM3P40198 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC12.69□□□□□ -0.38
CEACAM3P40198 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CEACAM3P40198 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC12.69□□□□□ -0.38
CEACAM3P40198 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC12.69□□□□□ -0.38
CEACAM3P40198 SPDYE19P-201ENST00000338590 713 ntBASIC12.69□□□□□ -0.38
CEACAM3P40198 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
CEACAM3P40198 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
CEACAM3P40198 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CEACAM3P40198 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CEACAM3P40198 WDR53-203ENST00000429115 683 ntTSL 2 BASIC12.69□□□□□ -0.38
CEACAM3P40198 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC12.69□□□□□ -0.38
CEACAM3P40198 RPL13AP25-201ENST00000484130 612 ntBASIC12.69□□□□□ -0.38
CEACAM3P40198 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC12.69□□□□□ -0.38
CEACAM3P40198 TERF1P3-201ENST00000505638 1227 ntBASIC12.69□□□□□ -0.38
CEACAM3P40198 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC12.69□□□□□ -0.38
CEACAM3P40198 AC104596.2-201ENST00000512793 793 ntBASIC12.69□□□□□ -0.38
CEACAM3P40198 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC12.69□□□□□ -0.38
CEACAM3P40198 AC055876.2-201ENST00000531834 546 ntBASIC12.69□□□□□ -0.38
CEACAM3P40198 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC12.69□□□□□ -0.38
CEACAM3P40198 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC12.69□□□□□ -0.38
CEACAM3P40198 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC12.69□□□□□ -0.38
CEACAM3P40198 MIR4745-201ENST00000577608 62 ntBASIC12.69□□□□□ -0.38
CEACAM3P40198 AC092364.2-202ENST00000597012 1073 ntBASIC12.69□□□□□ -0.38
CEACAM3P40198 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
CEACAM3P40198 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CEACAM3P40198 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC12.69□□□□□ -0.38
CEACAM3P40198 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
CEACAM3P40198 AC020658.6-201ENST00000623564 1870 ntBASIC12.69□□□□□ -0.38
CEACAM3P40198 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CEACAM3P40198 FUK-207ENST00000571514 3054 ntTSL 2 BASIC12.69□□□□□ -0.38
CEACAM3P40198 AC104581.4-201ENST00000623126 3052 ntBASIC12.69□□□□□ -0.38
CEACAM3P40198 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
CEACAM3P40198 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC12.69□□□□□ -0.38
CEACAM3P40198 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CEACAM3P40198 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
CEACAM3P40198 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CEACAM3P40198 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
CEACAM3P40198 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CEACAM3P40198 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CEACAM3P40198 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CEACAM3P40198 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
CEACAM3P40198 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
CEACAM3P40198 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC12.69□□□□□ -0.38
CEACAM3P40198 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC12.68□□□□□ -0.38
CEACAM3P40198 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CEACAM3P40198 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC12.68□□□□□ -0.38
CEACAM3P40198 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CEACAM3P40198 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
CEACAM3P40198 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC12.68□□□□□ -0.38
CEACAM3P40198 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC12.68□□□□□ -0.38
CEACAM3P40198 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC12.68□□□□□ -0.38
CEACAM3P40198 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CEACAM3P40198 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC12.68□□□□□ -0.38
CEACAM3P40198 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CEACAM3P40198 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
CEACAM3P40198 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CEACAM3P40198 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CEACAM3P40198 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CEACAM3P40198 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
CEACAM3P40198 RAC2-204ENST00000406508 893 ntTSL 5 BASIC12.68□□□□□ -0.38
CEACAM3P40198 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC12.68□□□□□ -0.38
CEACAM3P40198 DFFBP1-201ENST00000433250 979 ntBASIC12.68□□□□□ -0.38
CEACAM3P40198 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CEACAM3P40198 RARRES2P5-201ENST00000564013 466 ntBASIC12.68□□□□□ -0.38
CEACAM3P40198 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CEACAM3P40198 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC12.68□□□□□ -0.38
CEACAM3P40198 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC12.68□□□□□ -0.38
CEACAM3P40198 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CEACAM3P40198 AC008761.3-201ENST00000624803 892 ntBASIC12.68□□□□□ -0.38
CEACAM3P40198 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CEACAM3P40198 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
CEACAM3P40198 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CEACAM3P40198 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
CEACAM3P40198 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC12.68□□□□□ -0.38
CEACAM3P40198 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CEACAM3P40198 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
CEACAM3P40198 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CEACAM3P40198 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CEACAM3P40198 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CEACAM3P40198 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC12.68□□□□□ -0.38
CEACAM3P40198 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CEACAM3P40198 AC105250.1-201ENST00000509378 2057 ntBASIC12.68□□□□□ -0.38
CEACAM3P40198 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CEACAM3P40198 TMBIM7P-203ENST00000641617 1718 ntBASIC12.68□□□□□ -0.38
CEACAM3P40198 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CEACAM3P40198 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC12.68□□□□□ -0.38
CEACAM3P40198 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
CEACAM3P40198 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC12.68□□□□□ -0.38
CEACAM3P40198 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC12.68□□□□□ -0.38
CEACAM3P40198 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC12.68□□□□□ -0.38
CEACAM3P40198 AL121723.1-201ENST00000445194 1519 ntBASIC12.67□□□□□ -0.38
CEACAM3P40198 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
CEACAM3P40198 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CEACAM3P40198 CFAP46-202ENST00000368586 8278 ntAPPRIS P2 TSL 5 BASIC12.67□□□□□ -0.38
CEACAM3P40198 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms