Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 MIR4750-201ENST00000584564 56 ntBASIC18.85■□□□□ 0.61
PDE6BP35913 RN7SL555P-201ENST00000584742 339 ntBASIC18.85■□□□□ 0.61
PDE6BP35913 C19orf25-205ENST00000588427 853 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
PDE6BP35913 AL136301.1-201ENST00000615830 422 ntBASIC18.85■□□□□ 0.61
PDE6BP35913 PCBP2-OT1-201ENST00000634357 590 ntBASIC18.85■□□□□ 0.61
PDE6BP35913 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC18.85■□□□□ 0.61
PDE6BP35913 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PDE6BP35913 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PDE6BP35913 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PDE6BP35913 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC18.85■□□□□ 0.61
PDE6BP35913 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PDE6BP35913 TKT-202ENST00000423516 2075 ntTSL 2 BASIC18.85■□□□□ 0.61
PDE6BP35913 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
PDE6BP35913 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PDE6BP35913 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC18.84■□□□□ 0.61
PDE6BP35913 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
PDE6BP35913 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PDE6BP35913 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
PDE6BP35913 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC18.84■□□□□ 0.61
PDE6BP35913 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
PDE6BP35913 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
PDE6BP35913 AC104667.2-202ENST00000452801 1301 ntTSL 2 BASIC18.84■□□□□ 0.61
PDE6BP35913 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PDE6BP35913 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
PDE6BP35913 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
PDE6BP35913 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PDE6BP35913 TCEAL6-201ENST00000372773 983 ntAPPRIS P1 TSL 3 BASIC18.84■□□□□ 0.61
PDE6BP35913 FBXO44-203ENST00000376760 822 ntTSL 2 BASIC18.84■□□□□ 0.61
PDE6BP35913 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC18.84■□□□□ 0.61
PDE6BP35913 MYO16-AS1-201ENST00000439299 580 ntTSL 5 BASIC18.84■□□□□ 0.61
PDE6BP35913 HNRNPA1P36-201ENST00000521313 955 ntBASIC18.84■□□□□ 0.61
PDE6BP35913 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC18.84■□□□□ 0.61
PDE6BP35913 MIR4683-201ENST00000579659 81 ntBASIC18.84■□□□□ 0.61
PDE6BP35913 AL358472.3-201ENST00000608147 415 ntBASIC18.84■□□□□ 0.61
PDE6BP35913 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC18.84■□□□□ 0.61
PDE6BP35913 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
PDE6BP35913 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PDE6BP35913 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PDE6BP35913 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PDE6BP35913 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC18.84■□□□□ 0.61
PDE6BP35913 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PDE6BP35913 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC18.84■□□□□ 0.61
PDE6BP35913 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
PDE6BP35913 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC18.84■□□□□ 0.61
PDE6BP35913 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC18.84■□□□□ 0.61
PDE6BP35913 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
PDE6BP35913 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC18.83■□□□□ 0.61
PDE6BP35913 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
PDE6BP35913 PIGC-201ENST00000344529 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
PDE6BP35913 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC18.83■□□□□ 0.61
PDE6BP35913 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
PDE6BP35913 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC18.83■□□□□ 0.61
PDE6BP35913 BNIP1-201ENST00000231668 1339 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
PDE6BP35913 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC18.83■□□□□ 0.61
PDE6BP35913 UBXN11-207ENST00000374223 1312 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
PDE6BP35913 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
PDE6BP35913 AC073316.1-202ENST00000402115 988 ntTSL 5 BASIC18.83■□□□□ 0.6
PDE6BP35913 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC18.83■□□□□ 0.6
PDE6BP35913 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC18.83■□□□□ 0.6
PDE6BP35913 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
PDE6BP35913 LINC02046-201ENST00000469812 378 ntTSL 3 BASIC18.83■□□□□ 0.6
PDE6BP35913 AC105389.3-201ENST00000508038 907 ntTSL 5 BASIC18.83■□□□□ 0.6
PDE6BP35913 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC18.83■□□□□ 0.6
PDE6BP35913 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC18.83■□□□□ 0.6
PDE6BP35913 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC18.83■□□□□ 0.6
PDE6BP35913 AC103988.2-201ENST00000561804 725 ntBASIC18.83■□□□□ 0.6
PDE6BP35913 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
PDE6BP35913 AC009955.4-201ENST00000597192 544 ntBASIC18.83■□□□□ 0.6
PDE6BP35913 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC18.83■□□□□ 0.6
PDE6BP35913 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC18.83■□□□□ 0.6
PDE6BP35913 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
PDE6BP35913 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC18.83■□□□□ 0.6
PDE6BP35913 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PDE6BP35913 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC18.83■□□□□ 0.6
PDE6BP35913 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
PDE6BP35913 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
PDE6BP35913 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC18.83■□□□□ 0.6
PDE6BP35913 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PDE6BP35913 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PDE6BP35913 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PDE6BP35913 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PDE6BP35913 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
PDE6BP35913 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC18.83■□□□□ 0.6
PDE6BP35913 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
PDE6BP35913 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
PDE6BP35913 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
PDE6BP35913 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PDE6BP35913 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC18.83■□□□□ 0.6
PDE6BP35913 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
PDE6BP35913 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PDE6BP35913 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC18.83■□□□□ 0.6
PDE6BP35913 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC18.82■□□□□ 0.6
PDE6BP35913 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC18.82■□□□□ 0.6
PDE6BP35913 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC18.82■□□□□ 0.6
PDE6BP35913 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PDE6BP35913 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PDE6BP35913 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PDE6BP35913 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC18.82■□□□□ 0.6
PDE6BP35913 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
PDE6BP35913 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms