Protein–RNA interactions for Protein: P35443

THBS4, Thrombospondin-4, humanhuman

Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS4P35443 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC13.67□□□□□ -0.22
THBS4P35443 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC13.67□□□□□ -0.22
THBS4P35443 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
THBS4P35443 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
THBS4P35443 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
THBS4P35443 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
THBS4P35443 OSM-203ENST00000403463 464 ntTSL 3 BASIC13.67□□□□□ -0.22
THBS4P35443 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC13.67□□□□□ -0.22
THBS4P35443 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
THBS4P35443 TIMM17BP1-201ENST00000545713 516 ntBASIC13.67□□□□□ -0.22
THBS4P35443 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC13.67□□□□□ -0.22
THBS4P35443 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
THBS4P35443 AL132655.2-201ENST00000596276 594 ntBASIC13.67□□□□□ -0.22
THBS4P35443 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC13.67□□□□□ -0.22
THBS4P35443 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
THBS4P35443 AC004790.1-201ENST00000612686 536 ntBASIC13.67□□□□□ -0.22
THBS4P35443 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC13.67□□□□□ -0.22
THBS4P35443 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC13.67□□□□□ -0.22
THBS4P35443 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
THBS4P35443 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
THBS4P35443 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
THBS4P35443 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
THBS4P35443 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
THBS4P35443 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
THBS4P35443 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
THBS4P35443 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC13.67□□□□□ -0.22
THBS4P35443 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
THBS4P35443 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC13.67□□□□□ -0.22
THBS4P35443 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
THBS4P35443 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
THBS4P35443 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
THBS4P35443 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC13.67□□□□□ -0.22
THBS4P35443 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
THBS4P35443 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
THBS4P35443 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
THBS4P35443 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC13.66□□□□□ -0.22
THBS4P35443 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
THBS4P35443 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
THBS4P35443 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
THBS4P35443 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
THBS4P35443 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
THBS4P35443 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC13.66□□□□□ -0.22
THBS4P35443 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
THBS4P35443 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC13.66□□□□□ -0.22
THBS4P35443 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
THBS4P35443 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
THBS4P35443 POLL-217ENST00000628479 1953 ntTSL 5 BASIC13.66□□□□□ -0.22
THBS4P35443 Z97205.2-201ENST00000564697 1639 ntBASIC13.66□□□□□ -0.22
THBS4P35443 GRN-214ENST00000589265 1632 ntTSL 5 BASIC13.66□□□□□ -0.22
THBS4P35443 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
THBS4P35443 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
THBS4P35443 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
THBS4P35443 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC13.66□□□□□ -0.22
THBS4P35443 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
THBS4P35443 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
THBS4P35443 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC13.66□□□□□ -0.22
THBS4P35443 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC13.66□□□□□ -0.22
THBS4P35443 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
THBS4P35443 AC015922.1-201ENST00000421102 1152 ntBASIC13.66□□□□□ -0.22
THBS4P35443 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC13.66□□□□□ -0.22
THBS4P35443 CRB3P1-201ENST00000449338 276 ntBASIC13.66□□□□□ -0.22
THBS4P35443 NME4-207ENST00000450036 985 ntTSL 3 BASIC13.66□□□□□ -0.22
THBS4P35443 AL589987.1-201ENST00000453380 819 ntBASIC13.66□□□□□ -0.22
THBS4P35443 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC13.66□□□□□ -0.22
THBS4P35443 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC13.66□□□□□ -0.22
THBS4P35443 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC13.66□□□□□ -0.22
THBS4P35443 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC13.66□□□□□ -0.22
THBS4P35443 CDK4-206ENST00000549606 558 ntTSL 2 BASIC13.66□□□□□ -0.22
THBS4P35443 HNRNPUP1-201ENST00000554987 333 ntBASIC13.66□□□□□ -0.22
THBS4P35443 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
THBS4P35443 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC13.66□□□□□ -0.22
THBS4P35443 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC13.66□□□□□ -0.22
THBS4P35443 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC13.66□□□□□ -0.22
THBS4P35443 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
THBS4P35443 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
THBS4P35443 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
THBS4P35443 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
THBS4P35443 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
THBS4P35443 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC13.66□□□□□ -0.22
THBS4P35443 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
THBS4P35443 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC13.66□□□□□ -0.22
THBS4P35443 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
THBS4P35443 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC13.66□□□□□ -0.22
THBS4P35443 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
THBS4P35443 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
THBS4P35443 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
THBS4P35443 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC13.66□□□□□ -0.22
THBS4P35443 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
THBS4P35443 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
THBS4P35443 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
THBS4P35443 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
THBS4P35443 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
THBS4P35443 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
THBS4P35443 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC13.66□□□□□ -0.22
THBS4P35443 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
THBS4P35443 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
THBS4P35443 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
THBS4P35443 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
THBS4P35443 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
THBS4P35443 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 57.9 ms