Protein–RNA interactions for Protein: P26045

PTPN3, Tyrosine-protein phosphatase non-receptor type 3, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3P26045 AC011270.2-201ENST00000624293 2550 ntBASIC15.79■□□□□ 0.12
PTPN3P26045 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PTPN3P26045 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PTPN3P26045 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC15.78■□□□□ 0.12
PTPN3P26045 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
PTPN3P26045 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PTPN3P26045 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PTPN3P26045 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC15.78■□□□□ 0.12
PTPN3P26045 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PTPN3P26045 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PTPN3P26045 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
PTPN3P26045 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC15.78■□□□□ 0.12
PTPN3P26045 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
PTPN3P26045 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PTPN3P26045 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PTPN3P26045 MARS-233ENST00000628866 2583 ntTSL 5 BASIC15.78■□□□□ 0.12
PTPN3P26045 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PTPN3P26045 AC104457.1-201ENST00000401024 814 ntBASIC15.78■□□□□ 0.12
PTPN3P26045 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PTPN3P26045 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC15.78■□□□□ 0.12
PTPN3P26045 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PTPN3P26045 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC15.78■□□□□ 0.12
PTPN3P26045 NAA60-208ENST00000570819 833 ntTSL 2 BASIC15.78■□□□□ 0.12
PTPN3P26045 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PTPN3P26045 AP000845.1-201ENST00000581677 2131 ntBASIC15.78■□□□□ 0.12
PTPN3P26045 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC15.78■□□□□ 0.12
PTPN3P26045 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
PTPN3P26045 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
PTPN3P26045 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PTPN3P26045 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PTPN3P26045 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC15.78■□□□□ 0.12
PTPN3P26045 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC15.78■□□□□ 0.12
PTPN3P26045 AC063926.3-201ENST00000624734 5658 ntBASIC15.78■□□□□ 0.12
PTPN3P26045 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PTPN3P26045 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PTPN3P26045 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PTPN3P26045 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
PTPN3P26045 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
PTPN3P26045 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
PTPN3P26045 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
PTPN3P26045 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
PTPN3P26045 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC15.77■□□□□ 0.12
PTPN3P26045 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
PTPN3P26045 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
PTPN3P26045 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
PTPN3P26045 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
PTPN3P26045 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
PTPN3P26045 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
PTPN3P26045 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC15.77■□□□□ 0.12
PTPN3P26045 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.12
PTPN3P26045 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
PTPN3P26045 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC15.77■□□□□ 0.12
PTPN3P26045 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
PTPN3P26045 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
PTPN3P26045 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
PTPN3P26045 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
PTPN3P26045 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
PTPN3P26045 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC15.77■□□□□ 0.12
PTPN3P26045 RHOA-206ENST00000454011 889 ntTSL 2 BASIC15.77■□□□□ 0.12
PTPN3P26045 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC15.77■□□□□ 0.12
PTPN3P26045 DOC2GP-202ENST00000514950 1163 ntBASIC15.77■□□□□ 0.12
PTPN3P26045 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC15.77■□□□□ 0.12
PTPN3P26045 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC15.77■□□□□ 0.12
PTPN3P26045 AC023310.3-201ENST00000557027 670 ntBASIC15.77■□□□□ 0.12
PTPN3P26045 AC100756.1-201ENST00000562736 682 ntBASIC15.77■□□□□ 0.12
PTPN3P26045 RARRES2P5-201ENST00000564013 466 ntBASIC15.77■□□□□ 0.12
PTPN3P26045 AC138749.3-201ENST00000567691 622 ntBASIC15.77■□□□□ 0.12
PTPN3P26045 AC027796.2-201ENST00000575326 344 ntBASIC15.77■□□□□ 0.12
PTPN3P26045 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
PTPN3P26045 AC116165.1-201ENST00000611806 668 ntBASIC15.77■□□□□ 0.12
PTPN3P26045 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC15.77■□□□□ 0.12
PTPN3P26045 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.12
PTPN3P26045 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC15.77■□□□□ 0.11
PTPN3P26045 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC15.77■□□□□ 0.11
PTPN3P26045 NORAD-201ENST00000565493 5339 ntBASIC15.77■□□□□ 0.11
PTPN3P26045 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
PTPN3P26045 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
PTPN3P26045 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
PTPN3P26045 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.11
PTPN3P26045 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC15.77■□□□□ 0.11
PTPN3P26045 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
PTPN3P26045 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC15.77■□□□□ 0.11
PTPN3P26045 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
PTPN3P26045 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.11
PTPN3P26045 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
PTPN3P26045 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
PTPN3P26045 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC15.77■□□□□ 0.11
PTPN3P26045 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC15.77■□□□□ 0.11
PTPN3P26045 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.11
PTPN3P26045 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
PTPN3P26045 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
PTPN3P26045 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC15.77■□□□□ 0.11
PTPN3P26045 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC15.76■□□□□ 0.11
PTPN3P26045 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PTPN3P26045 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC15.76■□□□□ 0.11
PTPN3P26045 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
PTPN3P26045 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
PTPN3P26045 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
PTPN3P26045 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC15.76■□□□□ 0.11
PTPN3P26045 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms