Protein–RNA interactions for Protein: P12035

KRT3, Keratin, type II cytoskeletal 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT3P12035 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
KRT3P12035 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
KRT3P12035 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC16.35■□□□□ 0.21
KRT3P12035 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC16.35■□□□□ 0.21
KRT3P12035 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
KRT3P12035 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
KRT3P12035 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC16.35■□□□□ 0.21
KRT3P12035 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
KRT3P12035 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
KRT3P12035 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
KRT3P12035 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
KRT3P12035 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
KRT3P12035 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
KRT3P12035 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
KRT3P12035 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC16.35■□□□□ 0.21
KRT3P12035 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
KRT3P12035 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
KRT3P12035 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
KRT3P12035 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
KRT3P12035 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
KRT3P12035 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
KRT3P12035 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
KRT3P12035 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC16.34■□□□□ 0.21
KRT3P12035 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC16.34■□□□□ 0.21
KRT3P12035 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
KRT3P12035 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
KRT3P12035 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
KRT3P12035 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
KRT3P12035 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
KRT3P12035 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC16.34■□□□□ 0.21
KRT3P12035 TCAF2P1-201ENST00000291129 2421 ntBASIC16.34■□□□□ 0.21
KRT3P12035 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC16.34■□□□□ 0.21
KRT3P12035 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
KRT3P12035 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
KRT3P12035 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC16.34■□□□□ 0.21
KRT3P12035 ZEB1-AS1-208ENST00000607166 2503 ntBASIC16.34■□□□□ 0.21
KRT3P12035 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
KRT3P12035 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
KRT3P12035 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC16.34■□□□□ 0.21
KRT3P12035 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC16.34■□□□□ 0.21
KRT3P12035 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC16.34■□□□□ 0.21
KRT3P12035 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
KRT3P12035 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC16.34■□□□□ 0.21
KRT3P12035 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC16.34■□□□□ 0.21
KRT3P12035 SRD5A3P1-201ENST00000603021 949 ntBASIC16.34■□□□□ 0.21
KRT3P12035 AC025181.2-201ENST00000606994 802 ntBASIC16.34■□□□□ 0.21
KRT3P12035 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC16.34■□□□□ 0.21
KRT3P12035 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
KRT3P12035 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
KRT3P12035 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
KRT3P12035 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
KRT3P12035 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
KRT3P12035 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
KRT3P12035 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
KRT3P12035 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
KRT3P12035 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
KRT3P12035 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
KRT3P12035 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
KRT3P12035 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
KRT3P12035 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
KRT3P12035 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC16.34■□□□□ 0.21
KRT3P12035 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC16.34■□□□□ 0.21
KRT3P12035 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
KRT3P12035 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC16.34■□□□□ 0.21
KRT3P12035 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
KRT3P12035 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
KRT3P12035 POLL-217ENST00000628479 1953 ntTSL 5 BASIC16.33■□□□□ 0.21
KRT3P12035 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
KRT3P12035 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
KRT3P12035 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
KRT3P12035 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
KRT3P12035 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
KRT3P12035 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
KRT3P12035 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC16.33■□□□□ 0.2
KRT3P12035 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
KRT3P12035 MRPS18AP1-201ENST00000414458 589 ntBASIC16.33■□□□□ 0.2
KRT3P12035 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC16.33■□□□□ 0.2
KRT3P12035 RASL12-203ENST00000434605 982 ntTSL 2 BASIC16.33■□□□□ 0.2
KRT3P12035 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC16.33■□□□□ 0.2
KRT3P12035 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
KRT3P12035 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC16.33■□□□□ 0.2
KRT3P12035 SPDYE18-201ENST00000510091 1050 ntBASIC16.33■□□□□ 0.2
KRT3P12035 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC16.33■□□□□ 0.2
KRT3P12035 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC16.33■□□□□ 0.2
KRT3P12035 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC16.33■□□□□ 0.2
KRT3P12035 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC16.33■□□□□ 0.2
KRT3P12035 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
KRT3P12035 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC16.33■□□□□ 0.2
KRT3P12035 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC16.33■□□□□ 0.2
KRT3P12035 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
KRT3P12035 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
KRT3P12035 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
KRT3P12035 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
KRT3P12035 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
KRT3P12035 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC16.33■□□□□ 0.2
KRT3P12035 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
KRT3P12035 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC16.33■□□□□ 0.2
KRT3P12035 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
KRT3P12035 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
KRT3P12035 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms