Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC14.69□□□□□ -0.06
MT-ND1P03886 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
MT-ND1P03886 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
MT-ND1P03886 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC14.69□□□□□ -0.06
MT-ND1P03886 ACE3P-201ENST00000423435 1973 ntBASIC14.69□□□□□ -0.06
MT-ND1P03886 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
MT-ND1P03886 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
MT-ND1P03886 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
MT-ND1P03886 AC027601.5-201ENST00000624065 2482 ntBASIC14.69□□□□□ -0.06
MT-ND1P03886 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC14.69□□□□□ -0.06
MT-ND1P03886 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
MT-ND1P03886 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
MT-ND1P03886 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
MT-ND1P03886 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
MT-ND1P03886 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
MT-ND1P03886 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
MT-ND1P03886 AL590627.1-203ENST00000421194 1026 ntBASIC14.69□□□□□ -0.06
MT-ND1P03886 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC14.69□□□□□ -0.06
MT-ND1P03886 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC14.69□□□□□ -0.06
MT-ND1P03886 AL591424.1-201ENST00000442569 1213 ntBASIC14.69□□□□□ -0.06
MT-ND1P03886 FDX1P1-201ENST00000449115 551 ntBASIC14.69□□□□□ -0.06
MT-ND1P03886 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC14.69□□□□□ -0.06
MT-ND1P03886 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC14.69□□□□□ -0.06
MT-ND1P03886 RNA5SP416-201ENST00000516838 111 ntBASIC14.69□□□□□ -0.06
MT-ND1P03886 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC14.69□□□□□ -0.06
MT-ND1P03886 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC14.69□□□□□ -0.06
MT-ND1P03886 KLK8-205ENST00000593490 267 ntTSL 3 BASIC14.69□□□□□ -0.06
MT-ND1P03886 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC14.69□□□□□ -0.06
MT-ND1P03886 AL513190.1-201ENST00000621254 727 ntBASIC14.69□□□□□ -0.06
MT-ND1P03886 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC14.69□□□□□ -0.06
MT-ND1P03886 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
MT-ND1P03886 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC14.69□□□□□ -0.06
MT-ND1P03886 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
MT-ND1P03886 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
MT-ND1P03886 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC14.69□□□□□ -0.06
MT-ND1P03886 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC14.69□□□□□ -0.06
MT-ND1P03886 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
MT-ND1P03886 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC14.69□□□□□ -0.06
MT-ND1P03886 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
MT-ND1P03886 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
MT-ND1P03886 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC14.69□□□□□ -0.06
MT-ND1P03886 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
MT-ND1P03886 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC14.69□□□□□ -0.06
MT-ND1P03886 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC14.68□□□□□ -0.06
MT-ND1P03886 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
MT-ND1P03886 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
MT-ND1P03886 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
MT-ND1P03886 BX640514.1-201ENST00000583223 1918 ntBASIC14.68□□□□□ -0.06
MT-ND1P03886 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
MT-ND1P03886 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
MT-ND1P03886 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
MT-ND1P03886 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC14.68□□□□□ -0.06
MT-ND1P03886 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC14.68□□□□□ -0.06
MT-ND1P03886 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
MT-ND1P03886 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
MT-ND1P03886 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC14.68□□□□□ -0.06
MT-ND1P03886 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC14.68□□□□□ -0.06
MT-ND1P03886 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC14.68□□□□□ -0.06
MT-ND1P03886 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC14.68□□□□□ -0.06
MT-ND1P03886 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
MT-ND1P03886 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
MT-ND1P03886 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC14.68□□□□□ -0.06
MT-ND1P03886 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC14.68□□□□□ -0.06
MT-ND1P03886 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC14.68□□□□□ -0.06
MT-ND1P03886 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC14.68□□□□□ -0.06
MT-ND1P03886 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC14.68□□□□□ -0.06
MT-ND1P03886 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
MT-ND1P03886 RARRES2P8-201ENST00000566335 367 ntBASIC14.68□□□□□ -0.06
MT-ND1P03886 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC14.68□□□□□ -0.06
MT-ND1P03886 AL450472.2-201ENST00000603663 1156 ntBASIC14.68□□□□□ -0.06
MT-ND1P03886 BX640515.1-201ENST00000617215 977 ntBASIC14.68□□□□□ -0.06
MT-ND1P03886 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
MT-ND1P03886 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
MT-ND1P03886 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC14.68□□□□□ -0.06
MT-ND1P03886 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC14.68□□□□□ -0.06
MT-ND1P03886 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
MT-ND1P03886 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC14.68□□□□□ -0.06
MT-ND1P03886 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
MT-ND1P03886 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
MT-ND1P03886 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
MT-ND1P03886 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC14.68□□□□□ -0.06
MT-ND1P03886 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
MT-ND1P03886 C1R-201ENST00000535233 2211 ntTSL 2 BASIC14.68□□□□□ -0.06
MT-ND1P03886 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC14.68□□□□□ -0.06
MT-ND1P03886 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
MT-ND1P03886 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
MT-ND1P03886 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
MT-ND1P03886 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
MT-ND1P03886 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC14.67□□□□□ -0.06
MT-ND1P03886 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
MT-ND1P03886 FOXO1B-201ENST00000504678 1527 ntBASIC14.67□□□□□ -0.06
MT-ND1P03886 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC14.67□□□□□ -0.06
MT-ND1P03886 AMT-204ENST00000427987 1646 ntTSL 5 BASIC14.67□□□□□ -0.06
MT-ND1P03886 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC14.67□□□□□ -0.06
MT-ND1P03886 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
MT-ND1P03886 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC14.67□□□□□ -0.06
MT-ND1P03886 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
MT-ND1P03886 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
MT-ND1P03886 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
MT-ND1P03886 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 56.9 ms