Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC15.34■□□□□ 0.05
PDGFBP01127 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
PDGFBP01127 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.05
PDGFBP01127 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC15.33■□□□□ 0.05
PDGFBP01127 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.05
PDGFBP01127 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.05
PDGFBP01127 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC15.33■□□□□ 0.05
PDGFBP01127 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.05
PDGFBP01127 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC15.33■□□□□ 0.05
PDGFBP01127 SLC25A20-202ENST00000430379 1576 ntTSL 3 BASIC15.33■□□□□ 0.05
PDGFBP01127 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
PDGFBP01127 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PDGFBP01127 AC106886.4-201ENST00000623557 2502 ntBASIC15.33■□□□□ 0.04
PDGFBP01127 GON7-201ENST00000306954 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PDGFBP01127 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
PDGFBP01127 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PDGFBP01127 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC15.33■□□□□ 0.04
PDGFBP01127 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC15.33■□□□□ 0.04
PDGFBP01127 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC15.33■□□□□ 0.04
PDGFBP01127 AL139008.1-201ENST00000437894 228 ntBASIC15.33■□□□□ 0.04
PDGFBP01127 MIR503HG-202ENST00000440570 760 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
PDGFBP01127 UBXN7-AS1-201ENST00000442941 386 ntTSL 3 BASIC15.33■□□□□ 0.04
PDGFBP01127 KLF2P1-201ENST00000447438 1042 ntBASIC15.33■□□□□ 0.04
PDGFBP01127 AC018463.1-201ENST00000456674 917 ntBASIC15.33■□□□□ 0.04
PDGFBP01127 VDAC3-211ENST00000522572 799 ntTSL 5 BASIC15.33■□□□□ 0.04
PDGFBP01127 RPS25-202ENST00000527673 835 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PDGFBP01127 DNAJB13-203ENST00000537753 912 ntTSL 3 BASIC15.33■□□□□ 0.04
PDGFBP01127 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC15.33■□□□□ 0.04
PDGFBP01127 DNM1P51-201ENST00000558149 522 ntBASIC15.33■□□□□ 0.04
PDGFBP01127 PAM16-211ENST00000575848 518 ntTSL 3 BASIC15.33■□□□□ 0.04
PDGFBP01127 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
PDGFBP01127 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC15.33■□□□□ 0.04
PDGFBP01127 MIR3677-201ENST00000578964 60 ntBASIC15.33■□□□□ 0.04
PDGFBP01127 FAM104A-206ENST00000583024 417 ntTSL 3 BASIC15.33■□□□□ 0.04
PDGFBP01127 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC15.33■□□□□ 0.04
PDGFBP01127 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC15.33■□□□□ 0.04
PDGFBP01127 AC245100.1-201ENST00000452996 1331 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
PDGFBP01127 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
PDGFBP01127 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
PDGFBP01127 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PDGFBP01127 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
PDGFBP01127 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
PDGFBP01127 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
PDGFBP01127 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
PDGFBP01127 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC15.33■□□□□ 0.04
PDGFBP01127 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
PDGFBP01127 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC15.33■□□□□ 0.04
PDGFBP01127 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC15.33■□□□□ 0.04
PDGFBP01127 MAP2K6-205ENST00000589647 1512 ntTSL 5 BASIC15.33■□□□□ 0.04
PDGFBP01127 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
PDGFBP01127 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC15.32■□□□□ 0.04
PDGFBP01127 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PDGFBP01127 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PDGFBP01127 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PDGFBP01127 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC15.32■□□□□ 0.04
PDGFBP01127 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
PDGFBP01127 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PDGFBP01127 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC15.32■□□□□ 0.04
PDGFBP01127 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PDGFBP01127 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PDGFBP01127 C8G-201ENST00000224181 855 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PDGFBP01127 Z97652.1-201ENST00000415176 329 ntTSL 5 BASIC15.32■□□□□ 0.04
PDGFBP01127 TREX1-202ENST00000444177 1200 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PDGFBP01127 AC026410.1-201ENST00000507366 1101 ntBASIC15.32■□□□□ 0.04
PDGFBP01127 SHBG-207ENST00000570547 801 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PDGFBP01127 ZNF286A-219ENST00000585194 607 ntTSL 4 BASIC15.32■□□□□ 0.04
PDGFBP01127 AC018761.2-201ENST00000585496 296 ntTSL 3 BASIC15.32■□□□□ 0.04
PDGFBP01127 UXT-AS1-202ENST00000591832 565 ntTSL 4 BASIC15.32■□□□□ 0.04
PDGFBP01127 AC104333.4-201ENST00000632866 554 ntTSL 3 BASIC15.32■□□□□ 0.04
PDGFBP01127 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC15.32■□□□□ 0.04
PDGFBP01127 MBLAC2-202ENST00000514906 1936 ntBASIC15.32■□□□□ 0.04
PDGFBP01127 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
PDGFBP01127 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
PDGFBP01127 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC15.32■□□□□ 0.04
PDGFBP01127 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PDGFBP01127 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PDGFBP01127 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PDGFBP01127 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PDGFBP01127 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PDGFBP01127 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PDGFBP01127 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PDGFBP01127 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
PDGFBP01127 CHCHD7-202ENST00000355315 1535 ntTSL 2 BASIC15.32■□□□□ 0.04
PDGFBP01127 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC15.32■□□□□ 0.04
PDGFBP01127 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PDGFBP01127 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC15.31■□□□□ 0.04
PDGFBP01127 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC15.31■□□□□ 0.04
PDGFBP01127 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC15.31■□□□□ 0.04
PDGFBP01127 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PDGFBP01127 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PDGFBP01127 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PDGFBP01127 AC009093.2-202ENST00000620513 2079 ntBASIC15.31■□□□□ 0.04
PDGFBP01127 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
PDGFBP01127 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
PDGFBP01127 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
PDGFBP01127 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PDGFBP01127 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC15.31■□□□□ 0.04
PDGFBP01127 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC15.31■□□□□ 0.04
PDGFBP01127 PIGL-201ENST00000225609 1137 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PDGFBP01127 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 55.1 ms