Protein–RNA interactions for Protein: O60890

OPHN1, Oligophrenin-1, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPHN1O60890 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC16.25■□□□□ 0.19
OPHN1O60890 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
OPHN1O60890 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
OPHN1O60890 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC16.25■□□□□ 0.19
OPHN1O60890 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
OPHN1O60890 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
OPHN1O60890 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
OPHN1O60890 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC16.25■□□□□ 0.19
OPHN1O60890 INE1-201ENST00000456273 945 ntBASIC16.25■□□□□ 0.19
OPHN1O60890 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC16.25■□□□□ 0.19
OPHN1O60890 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
OPHN1O60890 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC16.25■□□□□ 0.19
OPHN1O60890 AC010336.2-201ENST00000564226 506 ntBASIC16.25■□□□□ 0.19
OPHN1O60890 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC16.25■□□□□ 0.19
OPHN1O60890 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
OPHN1O60890 RNA5-8SN1-201ENST00000610460 153 ntBASIC16.25■□□□□ 0.19
OPHN1O60890 RNA5-8SN5-202ENST00000612463 153 ntBASIC16.25■□□□□ 0.19
OPHN1O60890 RNA5-8SN4-201ENST00000613359 153 ntBASIC16.25■□□□□ 0.19
OPHN1O60890 RNA5-8SN5-201ENST00000619471 153 ntBASIC16.25■□□□□ 0.19
OPHN1O60890 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC16.25■□□□□ 0.19
OPHN1O60890 HADH-212ENST00000638621 741 ntTSL 5 BASIC16.25■□□□□ 0.19
OPHN1O60890 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC16.25■□□□□ 0.19
OPHN1O60890 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
OPHN1O60890 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
OPHN1O60890 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
OPHN1O60890 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
OPHN1O60890 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
OPHN1O60890 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
OPHN1O60890 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC16.25■□□□□ 0.19
OPHN1O60890 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
OPHN1O60890 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
OPHN1O60890 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC16.25■□□□□ 0.19
OPHN1O60890 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
OPHN1O60890 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
OPHN1O60890 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
OPHN1O60890 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
OPHN1O60890 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
OPHN1O60890 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
OPHN1O60890 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
OPHN1O60890 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC16.25■□□□□ 0.19
OPHN1O60890 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
OPHN1O60890 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC16.24■□□□□ 0.19
OPHN1O60890 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
OPHN1O60890 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
OPHN1O60890 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
OPHN1O60890 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC16.24■□□□□ 0.19
OPHN1O60890 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC16.24■□□□□ 0.19
OPHN1O60890 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC16.24■□□□□ 0.19
OPHN1O60890 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC16.24■□□□□ 0.19
OPHN1O60890 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
OPHN1O60890 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
OPHN1O60890 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC16.24■□□□□ 0.19
OPHN1O60890 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC16.24■□□□□ 0.19
OPHN1O60890 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
OPHN1O60890 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
OPHN1O60890 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC16.24■□□□□ 0.19
OPHN1O60890 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
OPHN1O60890 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
OPHN1O60890 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
OPHN1O60890 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC16.24■□□□□ 0.19
OPHN1O60890 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
OPHN1O60890 DFFBP1-201ENST00000433250 979 ntBASIC16.24■□□□□ 0.19
OPHN1O60890 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC16.24■□□□□ 0.19
OPHN1O60890 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC16.24■□□□□ 0.19
OPHN1O60890 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
OPHN1O60890 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC16.24■□□□□ 0.19
OPHN1O60890 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC16.24■□□□□ 0.19
OPHN1O60890 LITAF-210ENST00000571976 548 ntTSL 2 BASIC16.24■□□□□ 0.19
OPHN1O60890 LITAF-214ENST00000574703 486 ntTSL 2 BASIC16.24■□□□□ 0.19
OPHN1O60890 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
OPHN1O60890 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC16.24■□□□□ 0.19
OPHN1O60890 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
OPHN1O60890 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
OPHN1O60890 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
OPHN1O60890 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
OPHN1O60890 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
OPHN1O60890 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
OPHN1O60890 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
OPHN1O60890 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
OPHN1O60890 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
OPHN1O60890 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
OPHN1O60890 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
OPHN1O60890 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
OPHN1O60890 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
OPHN1O60890 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC16.24■□□□□ 0.19
OPHN1O60890 AL391825.1-201ENST00000457671 1364 ntBASIC16.24■□□□□ 0.19
OPHN1O60890 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
OPHN1O60890 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
OPHN1O60890 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
OPHN1O60890 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
OPHN1O60890 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
OPHN1O60890 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
OPHN1O60890 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC16.23■□□□□ 0.19
OPHN1O60890 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
OPHN1O60890 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC16.23■□□□□ 0.19
OPHN1O60890 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
OPHN1O60890 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
OPHN1O60890 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
OPHN1O60890 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC16.23■□□□□ 0.19
OPHN1O60890 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms