Protein–RNA interactions for Protein: O43623

SNAI2, Zinc finger protein SNAI2, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI2O43623 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
SNAI2O43623 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
SNAI2O43623 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
SNAI2O43623 GRK3-201ENST00000324198 9103 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
SNAI2O43623 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC11.69□□□□□ -0.54
SNAI2O43623 BRPF1-205ENST00000433861 4304 ntTSL 2 BASIC11.69□□□□□ -0.54
SNAI2O43623 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC11.69□□□□□ -0.54
SNAI2O43623 PPCDC-201ENST00000342932 2250 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
SNAI2O43623 OTP-201ENST00000306422 3669 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
SNAI2O43623 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
SNAI2O43623 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
SNAI2O43623 HOXA3-207ENST00000612286 3396 ntAPPRIS P1 TSL 2 BASIC11.68□□□□□ -0.54
SNAI2O43623 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
SNAI2O43623 BUB1B-PAK6-201ENST00000441369 2767 ntAPPRIS P1 TSL 2 BASIC11.68□□□□□ -0.54
SNAI2O43623 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
SNAI2O43623 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC11.68□□□□□ -0.54
SNAI2O43623 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
SNAI2O43623 RNF216-202ENST00000389902 3293 ntAPPRIS P4 TSL 1 (best) BASIC11.68□□□□□ -0.54
SNAI2O43623 WASHC2C-210ENST00000623400 4616 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
SNAI2O43623 TRPV4-202ENST00000418703 3247 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
SNAI2O43623 IL13RA1-202ENST00000371666 4036 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
SNAI2O43623 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC11.68□□□□□ -0.54
SNAI2O43623 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
SNAI2O43623 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
SNAI2O43623 UBFD1-207ENST00000567212 4727 ntAPPRIS ALT2 TSL 2 BASIC11.68□□□□□ -0.54
SNAI2O43623 SYCP2L-201ENST00000283141 3130 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
SNAI2O43623 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC11.68□□□□□ -0.54
SNAI2O43623 TOLLIP-202ENST00000317204 3617 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
SNAI2O43623 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
SNAI2O43623 MAGI3-202ENST00000369611 3596 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
SNAI2O43623 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
SNAI2O43623 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
SNAI2O43623 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
SNAI2O43623 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC11.68□□□□□ -0.54
SNAI2O43623 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC11.68□□□□□ -0.54
SNAI2O43623 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC11.68□□□□□ -0.54
SNAI2O43623 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC11.68□□□□□ -0.54
SNAI2O43623 FAM210CP-201ENST00000445714 574 ntBASIC11.68□□□□□ -0.54
SNAI2O43623 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC11.68□□□□□ -0.54
SNAI2O43623 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
SNAI2O43623 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC11.68□□□□□ -0.54
SNAI2O43623 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
SNAI2O43623 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC11.68□□□□□ -0.54
SNAI2O43623 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC11.68□□□□□ -0.54
SNAI2O43623 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC11.68□□□□□ -0.54
SNAI2O43623 AC243562.2-201ENST00000561247 970 ntBASIC11.68□□□□□ -0.54
SNAI2O43623 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC11.68□□□□□ -0.54
SNAI2O43623 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC11.68□□□□□ -0.54
SNAI2O43623 CLEC4GP1-201ENST00000596555 870 ntBASIC11.68□□□□□ -0.54
SNAI2O43623 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC11.68□□□□□ -0.54
SNAI2O43623 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
SNAI2O43623 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
SNAI2O43623 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC11.68□□□□□ -0.54
SNAI2O43623 AC009090.5-201ENST00000624886 2285 ntBASIC11.68□□□□□ -0.54
SNAI2O43623 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
SNAI2O43623 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC11.68□□□□□ -0.54
SNAI2O43623 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
SNAI2O43623 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
SNAI2O43623 NRP2-201ENST00000272849 5909 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
SNAI2O43623 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC11.68□□□□□ -0.54
SNAI2O43623 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC11.68□□□□□ -0.54
SNAI2O43623 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
SNAI2O43623 CLCN6-201ENST00000312413 5631 ntTSL 2 BASIC11.68□□□□□ -0.54
SNAI2O43623 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
SNAI2O43623 GRIN1-207ENST00000371560 3640 ntAPPRIS ALT1 TSL 1 (best) BASIC11.68□□□□□ -0.54
SNAI2O43623 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC11.68□□□□□ -0.54
SNAI2O43623 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
SNAI2O43623 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC11.68□□□□□ -0.54
SNAI2O43623 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC11.68□□□□□ -0.54
SNAI2O43623 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
SNAI2O43623 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC11.68□□□□□ -0.54
SNAI2O43623 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC11.68□□□□□ -0.54
SNAI2O43623 PRR34-201ENST00000396008 2817 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
SNAI2O43623 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
SNAI2O43623 STK33-217ENST00000534493 1895 ntTSL 2 BASIC11.68□□□□□ -0.54
SNAI2O43623 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
SNAI2O43623 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
SNAI2O43623 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC11.68□□□□□ -0.54
SNAI2O43623 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
SNAI2O43623 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
SNAI2O43623 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
SNAI2O43623 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC11.67□□□□□ -0.54
SNAI2O43623 NHLH2-202ENST00000369506 7226 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
SNAI2O43623 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
SNAI2O43623 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
SNAI2O43623 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
SNAI2O43623 AL031728.1-201ENST00000449034 2479 ntTSL 3 BASIC11.67□□□□□ -0.54
SNAI2O43623 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC11.67□□□□□ -0.54
SNAI2O43623 ARHGEF33-202ENST00000409978 4484 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
SNAI2O43623 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
SNAI2O43623 NRXN1-207ENST00000404971 7578 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
SNAI2O43623 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
SNAI2O43623 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
SNAI2O43623 CELP-203ENST00000624767 2414 ntTSL 5 BASIC11.67□□□□□ -0.54
SNAI2O43623 RALGAPA1-201ENST00000307138 7911 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
SNAI2O43623 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC11.67□□□□□ -0.54
SNAI2O43623 PRKCB-201ENST00000303531 7969 ntAPPRIS P4 TSL 1 (best) BASIC11.67□□□□□ -0.54
SNAI2O43623 SLC4A5-201ENST00000346834 6233 ntAPPRIS P4 TSL 5 BASIC11.67□□□□□ -0.54
SNAI2O43623 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC11.67□□□□□ -0.54
SNAI2O43623 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms