Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ATP2A1O14983 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ATP2A1O14983 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC17.65■□□□□ 0.42
ATP2A1O14983 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC17.64■□□□□ 0.42
ATP2A1O14983 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.42
ATP2A1O14983 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ATP2A1O14983 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
ATP2A1O14983 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
ATP2A1O14983 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ATP2A1O14983 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
ATP2A1O14983 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC17.64■□□□□ 0.41
ATP2A1O14983 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
ATP2A1O14983 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC17.64■□□□□ 0.41
ATP2A1O14983 AC104457.1-201ENST00000401024 814 ntBASIC17.64■□□□□ 0.41
ATP2A1O14983 RPL5P21-201ENST00000404620 815 ntBASIC17.64■□□□□ 0.41
ATP2A1O14983 Z93015.1-201ENST00000451718 390 ntBASIC17.64■□□□□ 0.41
ATP2A1O14983 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
ATP2A1O14983 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC17.64■□□□□ 0.41
ATP2A1O14983 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
ATP2A1O14983 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
ATP2A1O14983 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
ATP2A1O14983 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
ATP2A1O14983 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC17.64■□□□□ 0.41
ATP2A1O14983 AL158070.2-201ENST00000623713 1621 ntBASIC17.64■□□□□ 0.41
ATP2A1O14983 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
ATP2A1O14983 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
ATP2A1O14983 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ATP2A1O14983 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC17.64■□□□□ 0.41
ATP2A1O14983 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC17.64■□□□□ 0.41
ATP2A1O14983 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
ATP2A1O14983 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ATP2A1O14983 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ATP2A1O14983 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC17.63■□□□□ 0.41
ATP2A1O14983 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
ATP2A1O14983 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC17.63■□□□□ 0.41
ATP2A1O14983 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
ATP2A1O14983 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ATP2A1O14983 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ATP2A1O14983 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ATP2A1O14983 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ATP2A1O14983 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
ATP2A1O14983 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
ATP2A1O14983 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ATP2A1O14983 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ATP2A1O14983 MIR326-201ENST00000362220 95 ntBASIC17.63■□□□□ 0.41
ATP2A1O14983 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ATP2A1O14983 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC17.63■□□□□ 0.41
ATP2A1O14983 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
ATP2A1O14983 MIR1202-201ENST00000408529 83 ntBASIC17.63■□□□□ 0.41
ATP2A1O14983 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC17.63■□□□□ 0.41
ATP2A1O14983 ZNF767P-206ENST00000513792 565 ntBASIC17.63■□□□□ 0.41
ATP2A1O14983 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ATP2A1O14983 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC17.63■□□□□ 0.41
ATP2A1O14983 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC17.63■□□□□ 0.41
ATP2A1O14983 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC17.63■□□□□ 0.41
ATP2A1O14983 C2orf69P2-201ENST00000562032 1123 ntBASIC17.63■□□□□ 0.41
ATP2A1O14983 HNRNPA1P48-202ENST00000565308 961 ntBASIC17.63■□□□□ 0.41
ATP2A1O14983 AC103810.3-201ENST00000583567 96 ntBASIC17.63■□□□□ 0.41
ATP2A1O14983 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC17.63■□□□□ 0.41
ATP2A1O14983 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC17.63■□□□□ 0.41
ATP2A1O14983 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC17.63■□□□□ 0.41
ATP2A1O14983 KLK3-211ENST00000597483 810 ntTSL 2 BASIC17.63■□□□□ 0.41
ATP2A1O14983 AC244093.1-201ENST00000610837 814 ntBASIC17.63■□□□□ 0.41
ATP2A1O14983 AC091271.1-201ENST00000611877 1162 ntBASIC17.63■□□□□ 0.41
ATP2A1O14983 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
ATP2A1O14983 AL603764.1-201ENST00000636452 321 ntBASIC17.63■□□□□ 0.41
ATP2A1O14983 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
ATP2A1O14983 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ATP2A1O14983 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC17.63■□□□□ 0.41
ATP2A1O14983 WT1-209ENST00000530998 2421 ntTSL 2 BASIC17.63■□□□□ 0.41
ATP2A1O14983 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC17.63■□□□□ 0.41
ATP2A1O14983 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ATP2A1O14983 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ATP2A1O14983 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC17.63■□□□□ 0.41
ATP2A1O14983 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC17.63■□□□□ 0.41
ATP2A1O14983 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC17.63■□□□□ 0.41
ATP2A1O14983 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ATP2A1O14983 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
ATP2A1O14983 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ATP2A1O14983 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ATP2A1O14983 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
ATP2A1O14983 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ATP2A1O14983 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
ATP2A1O14983 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC17.62■□□□□ 0.41
ATP2A1O14983 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ATP2A1O14983 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
ATP2A1O14983 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
ATP2A1O14983 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
ATP2A1O14983 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
ATP2A1O14983 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
ATP2A1O14983 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ATP2A1O14983 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC17.62■□□□□ 0.41
ATP2A1O14983 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC17.62■□□□□ 0.41
ATP2A1O14983 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ATP2A1O14983 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC17.62■□□□□ 0.41
ATP2A1O14983 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ATP2A1O14983 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
ATP2A1O14983 MIR1247-201ENST00000408206 136 ntBASIC17.62■□□□□ 0.41
ATP2A1O14983 GPAA1P2-201ENST00000417923 928 ntBASIC17.62■□□□□ 0.41
ATP2A1O14983 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC17.62■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms